Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SRGAP3O43295 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SRGAP3O43295 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.2■■■□□ 2.58
SRGAP3O43295 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
SRGAP3O43295 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SRGAP3O43295 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.19■■■□□ 2.58
SRGAP3O43295 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SRGAP3O43295 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.18■■■□□ 2.58
SRGAP3O43295 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SRGAP3O43295 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SRGAP3O43295 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
SRGAP3O43295 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SRGAP3O43295 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.17■■■□□ 2.58
SRGAP3O43295 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SRGAP3O43295 BX255925.1-201ENST00000566954 1854 ntBASIC31.16■■■□□ 2.58
SRGAP3O43295 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
SRGAP3O43295 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
SRGAP3O43295 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SRGAP3O43295 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SRGAP3O43295 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SRGAP3O43295 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SRGAP3O43295 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
SRGAP3O43295 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SRGAP3O43295 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SRGAP3O43295 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SRGAP3O43295 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
SRGAP3O43295 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.14■■■□□ 2.58
SRGAP3O43295 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
SRGAP3O43295 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.14■■■□□ 2.58
SRGAP3O43295 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SRGAP3O43295 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.14■■■□□ 2.58
SRGAP3O43295 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
SRGAP3O43295 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
SRGAP3O43295 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
SRGAP3O43295 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SRGAP3O43295 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.12■■■□□ 2.57
SRGAP3O43295 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.12■■■□□ 2.57
SRGAP3O43295 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SRGAP3O43295 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SRGAP3O43295 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.1■■■□□ 2.57
SRGAP3O43295 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.1■■■□□ 2.57
SRGAP3O43295 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
SRGAP3O43295 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SRGAP3O43295 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.09■■■□□ 2.57
SRGAP3O43295 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
SRGAP3O43295 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SRGAP3O43295 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
SRGAP3O43295 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.08■■■□□ 2.57
SRGAP3O43295 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SRGAP3O43295 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
SRGAP3O43295 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SRGAP3O43295 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.06■■■□□ 2.56
SRGAP3O43295 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SRGAP3O43295 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SRGAP3O43295 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SRGAP3O43295 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.05■■■□□ 2.56
SRGAP3O43295 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
SRGAP3O43295 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.04■■■□□ 2.56
SRGAP3O43295 AC022413.1-201ENST00000624602 984 ntBASIC31.04■■■□□ 2.56
SRGAP3O43295 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
SRGAP3O43295 GPX1-201ENST00000419349 1106 ntBASIC31.03■■■□□ 2.56
SRGAP3O43295 AC060814.1-201ENST00000554326 538 ntBASIC31.03■■■□□ 2.56
SRGAP3O43295 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SRGAP3O43295 AL359258.2-201ENST00000564063 1566 ntBASIC31.02■■■□□ 2.56
SRGAP3O43295 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
SRGAP3O43295 HSD17B1P1-201ENST00000590052 955 ntBASIC31.02■■■□□ 2.56
SRGAP3O43295 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
SRGAP3O43295 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
SRGAP3O43295 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.01■■■□□ 2.55
SRGAP3O43295 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SRGAP3O43295 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SRGAP3O43295 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.01■■■□□ 2.55
SRGAP3O43295 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.01■■■□□ 2.55
SRGAP3O43295 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
SRGAP3O43295 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
SRGAP3O43295 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
SRGAP3O43295 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.99■■■□□ 2.55
SRGAP3O43295 AC126177.7-201ENST00000547904 679 ntBASIC30.99■■■□□ 2.55
SRGAP3O43295 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
SRGAP3O43295 WHAMMP3-201ENST00000611636 1609 ntBASIC30.98■■■□□ 2.55
SRGAP3O43295 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SRGAP3O43295 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SRGAP3O43295 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.98■■■□□ 2.55
SRGAP3O43295 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SRGAP3O43295 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
SRGAP3O43295 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
SRGAP3O43295 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
SRGAP3O43295 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SRGAP3O43295 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SRGAP3O43295 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SRGAP3O43295 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.95■■■□□ 2.55
SRGAP3O43295 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SRGAP3O43295 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
SRGAP3O43295 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SRGAP3O43295 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SRGAP3O43295 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
SRGAP3O43295 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.94■■■□□ 2.54
SRGAP3O43295 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.94■■■□□ 2.54
SRGAP3O43295 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.94■■■□□ 2.54
SRGAP3O43295 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms