Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3yl1O08641 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3yl1O08641 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.51■■□□□ 1.03
Sh3yl1O08641 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.5■■□□□ 1.03
Sh3yl1O08641 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.5■■□□□ 1.03
Sh3yl1O08641 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Sh3yl1O08641 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3yl1O08641 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3yl1O08641 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3yl1O08641 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Sh3yl1O08641 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3yl1O08641 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.49■■□□□ 1.03
Sh3yl1O08641 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3yl1O08641 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3yl1O08641 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Sh3yl1O08641 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.48■■□□□ 1.03
Sh3yl1O08641 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3yl1O08641 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.47■■□□□ 1.03
Sh3yl1O08641 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3yl1O08641 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3yl1O08641 Mir3960-201ENSMUST00000198213 73 ntBASIC21.46■■□□□ 1.03
Sh3yl1O08641 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3yl1O08641 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Sh3yl1O08641 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3yl1O08641 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Sh3yl1O08641 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.45■■□□□ 1.02
Sh3yl1O08641 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3yl1O08641 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3yl1O08641 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3yl1O08641 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3yl1O08641 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3yl1O08641 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3yl1O08641 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3yl1O08641 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.44■■□□□ 1.02
Sh3yl1O08641 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3yl1O08641 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3yl1O08641 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3yl1O08641 Gm45364-201ENSMUST00000210883 159 ntBASIC21.43■■□□□ 1.02
Sh3yl1O08641 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sh3yl1O08641 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.43■■□□□ 1.02
Sh3yl1O08641 Gm11175-201ENSMUST00000116172 543 ntBASIC21.42■■□□□ 1.02
Sh3yl1O08641 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.42■■□□□ 1.02
Sh3yl1O08641 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3yl1O08641 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.42■■□□□ 1.02
Sh3yl1O08641 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3yl1O08641 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3yl1O08641 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Sh3yl1O08641 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3yl1O08641 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.4■■□□□ 1.02
Sh3yl1O08641 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3yl1O08641 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3yl1O08641 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3yl1O08641 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Sh3yl1O08641 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3yl1O08641 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.39■■□□□ 1.01
Sh3yl1O08641 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3yl1O08641 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3yl1O08641 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Sh3yl1O08641 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3yl1O08641 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3yl1O08641 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3yl1O08641 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3yl1O08641 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Sh3yl1O08641 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3yl1O08641 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3yl1O08641 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3yl1O08641 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3yl1O08641 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3yl1O08641 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3yl1O08641 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3yl1O08641 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3yl1O08641 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3yl1O08641 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3yl1O08641 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3yl1O08641 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Sh3yl1O08641 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3yl1O08641 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3yl1O08641 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3yl1O08641 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3yl1O08641 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3yl1O08641 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3yl1O08641 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3yl1O08641 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Sh3yl1O08641 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3yl1O08641 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3yl1O08641 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3yl1O08641 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.34■■□□□ 1.01
Sh3yl1O08641 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.33■■□□□ 1.01
Sh3yl1O08641 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3yl1O08641 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3yl1O08641 Scarna2-201ENSMUST00000157560 414 ntBASIC21.33■■□□□ 1.01
Sh3yl1O08641 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3yl1O08641 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.33■■□□□ 1
Sh3yl1O08641 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.32■■□□□ 1
Sh3yl1O08641 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.32■■□□□ 1
Sh3yl1O08641 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3yl1O08641 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3yl1O08641 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3yl1O08641 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3yl1O08641 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms