Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc149F6V035 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.25■■□□□ 1.31
Ccdc149F6V035 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc149F6V035 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc149F6V035 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc149F6V035 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc149F6V035 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.24■■□□□ 1.31
Ccdc149F6V035 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.24■■□□□ 1.31
Ccdc149F6V035 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.23■■□□□ 1.31
Ccdc149F6V035 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.23■■□□□ 1.31
Ccdc149F6V035 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc149F6V035 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Ccdc149F6V035 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Ccdc149F6V035 Gm44428-201ENSMUST00000204474 874 ntBASIC23.22■■□□□ 1.31
Ccdc149F6V035 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc149F6V035 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc149F6V035 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc149F6V035 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc149F6V035 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc149F6V035 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.2■■□□□ 1.3
Ccdc149F6V035 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc149F6V035 Gm10420-201ENSMUST00000121713 882 ntBASIC23.2■■□□□ 1.3
Ccdc149F6V035 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc149F6V035 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.2■■□□□ 1.3
Ccdc149F6V035 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Ccdc149F6V035 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc149F6V035 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc149F6V035 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc149F6V035 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc149F6V035 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc149F6V035 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc149F6V035 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Ccdc149F6V035 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc149F6V035 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc149F6V035 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc149F6V035 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc149F6V035 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc149F6V035 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.16■■□□□ 1.3
Ccdc149F6V035 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc149F6V035 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc149F6V035 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.15■■□□□ 1.3
Ccdc149F6V035 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc149F6V035 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc149F6V035 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ccdc149F6V035 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.15■■□□□ 1.3
Ccdc149F6V035 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc149F6V035 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc149F6V035 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc149F6V035 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc149F6V035 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc149F6V035 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc149F6V035 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc149F6V035 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc149F6V035 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.13■■□□□ 1.29
Ccdc149F6V035 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc149F6V035 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc149F6V035 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.12■■□□□ 1.29
Ccdc149F6V035 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Ccdc149F6V035 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc149F6V035 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc149F6V035 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc149F6V035 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Ccdc149F6V035 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc149F6V035 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc149F6V035 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc149F6V035 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Ccdc149F6V035 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc149F6V035 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc149F6V035 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Ccdc149F6V035 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc149F6V035 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc149F6V035 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc149F6V035 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.07■■□□□ 1.28
Ccdc149F6V035 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Ccdc149F6V035 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.06■■□□□ 1.28
Ccdc149F6V035 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Ccdc149F6V035 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc149F6V035 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Ccdc149F6V035 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Ccdc149F6V035 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.04■■□□□ 1.28
Ccdc149F6V035 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc149F6V035 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Ccdc149F6V035 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc149F6V035 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc149F6V035 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc149F6V035 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.02■■□□□ 1.28
Ccdc149F6V035 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc149F6V035 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc149F6V035 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc149F6V035 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
Ccdc149F6V035 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc149F6V035 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.01■■□□□ 1.27
Ccdc149F6V035 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.01■■□□□ 1.27
Ccdc149F6V035 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc149F6V035 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc149F6V035 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ccdc149F6V035 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ccdc149F6V035 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ccdc149F6V035 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ccdc149F6V035 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms