Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
A0A1W2PRF3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.45■□□□□ 0.86
A0A1W2PRF3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
A0A1W2PRF3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
A0A1W2PRF3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
A0A1W2PRF3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
A0A1W2PRF3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
A0A1W2PRF3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.44■□□□□ 0.86
A0A1W2PRF3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
A0A1W2PRF3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
A0A1W2PRF3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.44■□□□□ 0.86
A0A1W2PRF3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
A0A1W2PRF3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.44■□□□□ 0.86
A0A1W2PRF3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
A0A1W2PRF3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
A0A1W2PRF3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
A0A1W2PRF3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.42■□□□□ 0.86
A0A1W2PRF3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
A0A1W2PRF3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.42■□□□□ 0.86
A0A1W2PRF3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.42■□□□□ 0.86
A0A1W2PRF3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.42■□□□□ 0.86
A0A1W2PRF3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
A0A1W2PRF3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
A0A1W2PRF3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
A0A1W2PRF3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.41■□□□□ 0.86
A0A1W2PRF3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.41■□□□□ 0.86
A0A1W2PRF3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
A0A1W2PRF3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
A0A1W2PRF3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
A0A1W2PRF3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
A0A1W2PRF3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.4■□□□□ 0.86
A0A1W2PRF3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.4■□□□□ 0.86
A0A1W2PRF3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
A0A1W2PRF3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.39■□□□□ 0.86
A0A1W2PRF3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
A0A1W2PRF3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
A0A1W2PRF3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
A0A1W2PRF3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
A0A1W2PRF3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.38■□□□□ 0.85
A0A1W2PRF3 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.38■□□□□ 0.85
A0A1W2PRF3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
A0A1W2PRF3 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.38■□□□□ 0.85
A0A1W2PRF3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
A0A1W2PRF3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
A0A1W2PRF3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
A0A1W2PRF3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
A0A1W2PRF3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
A0A1W2PRF3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.37■□□□□ 0.85
A0A1W2PRF3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
A0A1W2PRF3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
A0A1W2PRF3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
A0A1W2PRF3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
A0A1W2PRF3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
A0A1W2PRF3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
A0A1W2PRF3 AC060814.1-201ENST00000554326 538 ntBASIC20.36■□□□□ 0.85
A0A1W2PRF3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
A0A1W2PRF3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
A0A1W2PRF3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
A0A1W2PRF3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
A0A1W2PRF3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.35■□□□□ 0.85
A0A1W2PRF3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.35■□□□□ 0.85
A0A1W2PRF3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
A0A1W2PRF3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
A0A1W2PRF3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.34■□□□□ 0.85
A0A1W2PRF3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.34■□□□□ 0.85
A0A1W2PRF3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
A0A1W2PRF3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
A0A1W2PRF3 AL359258.2-201ENST00000564063 1566 ntBASIC20.34■□□□□ 0.85
A0A1W2PRF3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
A0A1W2PRF3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
A0A1W2PRF3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
A0A1W2PRF3 AC018358.1-201ENST00000631079 1402 ntBASIC20.33■□□□□ 0.84
A0A1W2PRF3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
A0A1W2PRF3 RARRES2P2-201ENST00000394842 485 ntBASIC20.32■□□□□ 0.84
A0A1W2PRF3 AC126177.7-201ENST00000547904 679 ntBASIC20.32■□□□□ 0.84
A0A1W2PRF3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
A0A1W2PRF3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
A0A1W2PRF3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
A0A1W2PRF3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.32■□□□□ 0.84
A0A1W2PRF3 RNF126P1-201ENST00000567452 1320 ntBASIC20.31■□□□□ 0.84
A0A1W2PRF3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
A0A1W2PRF3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.3■□□□□ 0.84
A0A1W2PRF3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.3■□□□□ 0.84
A0A1W2PRF3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
A0A1W2PRF3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
A0A1W2PRF3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
A0A1W2PRF3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
A0A1W2PRF3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
A0A1W2PRF3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
A0A1W2PRF3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
A0A1W2PRF3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
A0A1W2PRF3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.28■□□□□ 0.84
A0A1W2PRF3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
A0A1W2PRF3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
A0A1W2PRF3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
A0A1W2PRF3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
A0A1W2PRF3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
A0A1W2PRF3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.27■□□□□ 0.84
A0A1W2PRF3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.27■□□□□ 0.84
A0A1W2PRF3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms