Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.75■□□□□ 0.43
Trav7-5A0A0G2JFX6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-5A0A0G2JFX6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-5A0A0G2JFX6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-5A0A0G2JFX6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav7-5A0A0G2JFX6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav7-5A0A0G2JFX6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav7-5A0A0G2JFX6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trav7-5A0A0G2JFX6 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.73■□□□□ 0.43
Trav7-5A0A0G2JFX6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-5A0A0G2JFX6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-5A0A0G2JFX6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-5A0A0G2JFX6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-5A0A0G2JFX6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Trav7-5A0A0G2JFX6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-5A0A0G2JFX6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-5A0A0G2JFX6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-5A0A0G2JFX6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7-5A0A0G2JFX6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trav7-5A0A0G2JFX6 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.71■□□□□ 0.43
Trav7-5A0A0G2JFX6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-5A0A0G2JFX6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-5A0A0G2JFX6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-5A0A0G2JFX6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-5A0A0G2JFX6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-5A0A0G2JFX6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-5A0A0G2JFX6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-5A0A0G2JFX6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav7-5A0A0G2JFX6 Gm45364-201ENSMUST00000210883 159 ntBASIC17.69■□□□□ 0.42
Trav7-5A0A0G2JFX6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.69■□□□□ 0.42
Trav7-5A0A0G2JFX6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-5A0A0G2JFX6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7-5A0A0G2JFX6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
Trav7-5A0A0G2JFX6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trav7-5A0A0G2JFX6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7-5A0A0G2JFX6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-5A0A0G2JFX6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-5A0A0G2JFX6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-5A0A0G2JFX6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav7-5A0A0G2JFX6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-5A0A0G2JFX6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav7-5A0A0G2JFX6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-5A0A0G2JFX6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-5A0A0G2JFX6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-5A0A0G2JFX6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-5A0A0G2JFX6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav7-5A0A0G2JFX6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7-5A0A0G2JFX6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.66■□□□□ 0.42
Trav7-5A0A0G2JFX6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7-5A0A0G2JFX6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7-5A0A0G2JFX6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-5A0A0G2JFX6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-5A0A0G2JFX6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-5A0A0G2JFX6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-5A0A0G2JFX6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-5A0A0G2JFX6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-5A0A0G2JFX6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-5A0A0G2JFX6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trav7-5A0A0G2JFX6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-5A0A0G2JFX6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-5A0A0G2JFX6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav7-5A0A0G2JFX6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-5A0A0G2JFX6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav7-5A0A0G2JFX6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-5A0A0G2JFX6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-5A0A0G2JFX6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.63■□□□□ 0.41
Trav7-5A0A0G2JFX6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-5A0A0G2JFX6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trav7-5A0A0G2JFX6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav7-5A0A0G2JFX6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-5A0A0G2JFX6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-5A0A0G2JFX6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-5A0A0G2JFX6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-5A0A0G2JFX6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-5A0A0G2JFX6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-5A0A0G2JFX6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Trav7-5A0A0G2JFX6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-5A0A0G2JFX6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav7-5A0A0G2JFX6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trav7-5A0A0G2JFX6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-5A0A0G2JFX6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-5A0A0G2JFX6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-5A0A0G2JFX6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-5A0A0G2JFX6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-5A0A0G2JFX6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-5A0A0G2JFX6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-5A0A0G2JFX6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-5A0A0G2JFX6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-5A0A0G2JFX6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Trav7-5A0A0G2JFX6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-5A0A0G2JFX6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-5A0A0G2JFX6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-5A0A0G2JFX6 Terc-201ENSMUST00000082862 423 ntBASIC17.59■□□□□ 0.41
Trav7-5A0A0G2JFX6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav7-5A0A0G2JFX6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Trav7-5A0A0G2JFX6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav7-5A0A0G2JFX6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7-5A0A0G2JFX6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7-5A0A0G2JFX6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7-5A0A0G2JFX6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms