Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ighv1-43A0A0A6YXN5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.2■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.2■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-43A0A0A6YXN5 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.18■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.17■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.16■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Ighv1-43A0A0A6YXN5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.14■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv1-43A0A0A6YXN5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.13■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.13■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.12■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Gm44428-201ENSMUST00000204474 874 ntBASIC21.12■□□□□ 0.97
Ighv1-43A0A0A6YXN5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-43A0A0A6YXN5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.12■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.1■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.1■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.09■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.09■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-43A0A0A6YXN5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.06■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.04■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.04■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-43A0A0A6YXN5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-43A0A0A6YXN5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.03■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Gm10420-201ENSMUST00000121713 882 ntBASIC21.02■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv1-43A0A0A6YXN5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.01■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-43A0A0A6YXN5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-43A0A0A6YXN5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.99■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms