Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav1A0A075B5Z4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Trav1A0A075B5Z4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav1A0A075B5Z4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.22■□□□□ 0.99
Trav1A0A075B5Z4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
Trav1A0A075B5Z4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trav1A0A075B5Z4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.22■□□□□ 0.99
Trav1A0A075B5Z4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav1A0A075B5Z4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav1A0A075B5Z4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav1A0A075B5Z4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trav1A0A075B5Z4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav1A0A075B5Z4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trav1A0A075B5Z4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav1A0A075B5Z4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav1A0A075B5Z4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav1A0A075B5Z4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trav1A0A075B5Z4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trav1A0A075B5Z4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav1A0A075B5Z4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trav1A0A075B5Z4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.19■□□□□ 0.98
Trav1A0A075B5Z4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trav1A0A075B5Z4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trav1A0A075B5Z4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trav1A0A075B5Z4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.18■□□□□ 0.98
Trav1A0A075B5Z4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav1A0A075B5Z4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trav1A0A075B5Z4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trav1A0A075B5Z4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav1A0A075B5Z4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trav1A0A075B5Z4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav1A0A075B5Z4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Trav1A0A075B5Z4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trav1A0A075B5Z4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trav1A0A075B5Z4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav1A0A075B5Z4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav1A0A075B5Z4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav1A0A075B5Z4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trav1A0A075B5Z4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Trav1A0A075B5Z4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trav1A0A075B5Z4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav1A0A075B5Z4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav1A0A075B5Z4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav1A0A075B5Z4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav1A0A075B5Z4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav1A0A075B5Z4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav1A0A075B5Z4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav1A0A075B5Z4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trav1A0A075B5Z4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav1A0A075B5Z4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trav1A0A075B5Z4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trav1A0A075B5Z4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav1A0A075B5Z4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav1A0A075B5Z4 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.1■□□□□ 0.97
Trav1A0A075B5Z4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav1A0A075B5Z4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
Trav1A0A075B5Z4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav1A0A075B5Z4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.09■□□□□ 0.97
Trav1A0A075B5Z4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trav1A0A075B5Z4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav1A0A075B5Z4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav1A0A075B5Z4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.08■□□□□ 0.97
Trav1A0A075B5Z4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.08■□□□□ 0.97
Trav1A0A075B5Z4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trav1A0A075B5Z4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trav1A0A075B5Z4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav1A0A075B5Z4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trav1A0A075B5Z4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav1A0A075B5Z4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.07■□□□□ 0.96
Trav1A0A075B5Z4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav1A0A075B5Z4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav1A0A075B5Z4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Trav1A0A075B5Z4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trav1A0A075B5Z4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.05■□□□□ 0.96
Trav1A0A075B5Z4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav1A0A075B5Z4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.04■□□□□ 0.96
Trav1A0A075B5Z4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav1A0A075B5Z4 Gm4799-201ENSMUST00000095396 657 ntBASIC21.04■□□□□ 0.96
Trav1A0A075B5Z4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.04■□□□□ 0.96
Trav1A0A075B5Z4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav1A0A075B5Z4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Trav1A0A075B5Z4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Trav1A0A075B5Z4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav1A0A075B5Z4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav1A0A075B5Z4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav1A0A075B5Z4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trav1A0A075B5Z4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav1A0A075B5Z4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav1A0A075B5Z4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Trav1A0A075B5Z4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav1A0A075B5Z4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.02■□□□□ 0.96
Trav1A0A075B5Z4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav1A0A075B5Z4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trav1A0A075B5Z4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trav1A0A075B5Z4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trav1A0A075B5Z4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trav1A0A075B5Z4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.01■□□□□ 0.95
Trav1A0A075B5Z4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.01■□□□□ 0.95
Trav1A0A075B5Z4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trav1A0A075B5Z4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms