Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 MIR149-201ENST00000384879 89 ntBASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 CHCHD2P8-201ENST00000429873 447 ntBASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 AC092329.2-201ENST00000598402 547 ntBASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 AC099343.3-201ENST00000605834 2503 ntBASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 AC009102.3-201ENST00000623118 1491 ntBASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 AL499627.1-201ENST00000569373 2188 ntBASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 KRT18P1-202ENST00000452408 1331 ntBASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00588Q9Y4M8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 AP002383.4-201ENST00000442518 975 ntBASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
LINC00588Q9Y4M8 AP002414.4-201ENST00000589764 1148 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms