Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 KRT8P32-201ENST00000512863 1461 ntBASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 TREX1-205ENST00000625293 1783 ntBASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 PVRIG2P-201ENST00000435460 978 ntBASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 DRAXINP1-201ENST00000437611 948 ntBASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 AC009065.1-201ENST00000564055 1225 ntBASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 RN7SL510P-201ENST00000581311 263 ntBASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX2IPQ9Y2D8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 AC090616.6-201ENST00000582640 721 ntBASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SSX2IPQ9Y2D8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX2IPQ9Y2D8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms