Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
SHANK2Q9UPX8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SHANK2Q9UPX8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SHANK2Q9UPX8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SHANK2Q9UPX8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
SHANK2Q9UPX8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SHANK2Q9UPX8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC27.34■■□□□ 1.97
SHANK2Q9UPX8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 AF228730.7-201ENST00000641842 219 ntBASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC27.33■■□□□ 1.97
SHANK2Q9UPX8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
SHANK2Q9UPX8 LINC01126-201ENST00000623515 1646 ntBASIC27.33■■□□□ 1.96
SHANK2Q9UPX8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 FAM220CP-201ENST00000395253 831 ntBASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 MIR1233-2-201ENST00000408138 82 ntBASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 MIR1233-1-201ENST00000408722 82 ntBASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 HMGN1P19-201ENST00000436976 333 ntBASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 FGFR3P6-201ENST00000457012 610 ntBASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 RBM17P3-201ENST00000417687 1192 ntBASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 KRT18P65-201ENST00000439811 1286 ntBASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 AC068472.1-201ENST00000474589 881 ntBASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SHANK2Q9UPX8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 AC011467.2-201ENST00000598425 242 ntBASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHANK2Q9UPX8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 ANO7L1-203ENST00000602586 1720 ntBASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 AP001005.1-201ENST00000571755 1248 ntBASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 AP001269.4-201ENST00000609611 512 ntBASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC27.3■■□□□ 1.96
SHANK2Q9UPX8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 AL355877.3-201ENST00000622820 899 ntBASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms