Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL139424.1-201ENST00000607572 797 ntBASIC34.96■■■■□ 3.19
SHROOM4Q9ULL8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
SHROOM4Q9ULL8 AC034236.2-201ENST00000606662 1610 ntBASIC34.96■■■■□ 3.19
SHROOM4Q9ULL8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC34.96■■■■□ 3.19
SHROOM4Q9ULL8 ZNF259P1-201ENST00000407656 1365 ntBASIC34.96■■■■□ 3.19
SHROOM4Q9ULL8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 POM121L3P-201ENST00000419331 1163 ntBASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 IGHV3-41-201ENST00000613121 348 ntBASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
SHROOM4Q9ULL8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.18
SHROOM4Q9ULL8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC34.95■■■■□ 3.18
SHROOM4Q9ULL8 NFYC-AS1-201ENST00000606277 1687 ntBASIC34.95■■■■□ 3.18
SHROOM4Q9ULL8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 AL357033.4-201ENST00000617703 1807 ntBASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 IGHV3-22-201ENST00000520721 359 ntBASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 AC055717.3-201ENST00000622967 595 ntBASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 HEIH-201ENST00000623091 1652 ntBASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
SHROOM4Q9ULL8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
SHROOM4Q9ULL8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
SHROOM4Q9ULL8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
SHROOM4Q9ULL8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC34.93■■■■□ 3.18
SHROOM4Q9ULL8 RPL13AP23-201ENST00000480739 586 ntBASIC34.93■■■■□ 3.18
SHROOM4Q9ULL8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC34.93■■■■□ 3.18
SHROOM4Q9ULL8 MIR3180-4-201ENST00000582223 153 ntBASIC34.93■■■■□ 3.18
SHROOM4Q9ULL8 FAM197Y3-203ENST00000618346 717 ntBASIC34.93■■■■□ 3.18
SHROOM4Q9ULL8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
SHROOM4Q9ULL8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 SCARNA2-201ENST00000458748 420 ntBASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 AC027796.2-201ENST00000575326 344 ntBASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
SHROOM4Q9ULL8 AC116562.4-201ENST00000641316 2276 ntBASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 FAM215A-202ENST00000632077 792 ntBASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 PKD1P6-201ENST00000343738 4769 ntBASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
SHROOM4Q9ULL8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 RPSAP43-201ENST00000402237 625 ntBASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 KRT8P50-201ENST00000562022 1438 ntBASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 GUSBP12-201ENST00000513727 720 ntBASIC34.9■■■■□ 3.18
SHROOM4Q9ULL8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC34.9■■■■□ 3.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms