Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 AC092119.3-201ENST00000612618 583 ntBASIC17.34■□□□□ 0.37
CTSFQ9UBX1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSFQ9UBX1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CTSFQ9UBX1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.33■□□□□ 0.37
CTSFQ9UBX1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSFQ9UBX1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSFQ9UBX1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.33■□□□□ 0.37
CTSFQ9UBX1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSFQ9UBX1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSFQ9UBX1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSFQ9UBX1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTSFQ9UBX1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.33■□□□□ 0.37
CTSFQ9UBX1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 AC016734.2-201ENST00000624325 1377 ntBASIC17.33■□□□□ 0.36
CTSFQ9UBX1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 ATP5G2P1-201ENST00000433580 426 ntBASIC17.33■□□□□ 0.36
CTSFQ9UBX1 TSSC2-201ENST00000450217 709 ntBASIC17.33■□□□□ 0.36
CTSFQ9UBX1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 AL121672.3-201ENST00000608644 468 ntBASIC17.33■□□□□ 0.36
CTSFQ9UBX1 NPAP1P7-201ENST00000613027 823 ntBASIC17.33■□□□□ 0.36
CTSFQ9UBX1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.33■□□□□ 0.36
CTSFQ9UBX1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 Z83836.1-201ENST00000624605 1642 ntBASIC17.32■□□□□ 0.36
CTSFQ9UBX1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 TSPY22P-201ENST00000427496 604 ntBASIC17.32■□□□□ 0.36
CTSFQ9UBX1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSFQ9UBX1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 AP003733.1-201ENST00000491725 852 ntBASIC17.31■□□□□ 0.36
CTSFQ9UBX1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 KRT8P26-201ENST00000534154 1276 ntBASIC17.31■□□□□ 0.36
CTSFQ9UBX1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms