Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 AP000692.2-201ENST00000608391 879 ntBASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 CD99P1-205ENST00000527459 561 ntBASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 DGCR10-201ENST00000609839 495 ntBASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.07■□□□□ 0.32
POLR2J3Q9H1A7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 AC008040.2-201ENST00000461049 708 ntBASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 MYLKP1-201ENST00000509077 1580 ntBASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
POLR2J3Q9H1A7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 AC020916.1-201ENST00000587762 1774 ntBASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 AC096733.2-201ENST00000609937 1394 ntBASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 AC011506.1-201ENST00000474329 610 ntBASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms