Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 C1orf229-201ENST00000623686 2258 ntBASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 PIN1P1-201ENST00000412108 996 ntBASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 FAM8A2P-201ENST00000528813 1142 ntBASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 RCC2P3-201ENST00000418112 1537 ntBASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL25A1Q9BXS0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 IGLL3P-201ENST00000412472 434 ntBASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 AL390754.1-201ENST00000619088 582 ntBASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.56■□□□□ 0.56
COL25A1Q9BXS0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 AC104417.2-201ENST00000562989 1793 ntBASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL25A1Q9BXS0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 TUBB3P1-201ENST00000405796 1332 ntBASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 KLF2P3-201ENST00000451977 1087 ntBASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 AC008687.5-201ENST00000593746 558 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms