Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 AC134043.2-201ENST00000624206 2238 ntBASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HERPUD2Q9BSE4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 AL390955.1-201ENST00000428694 934 ntBASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 BX088651.1-201ENST00000540551 451 ntBASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 AP005242.2-201ENST00000580065 1175 ntBASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HERPUD2Q9BSE4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 AP000593.1-201ENST00000393668 712 ntBASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 AP003041.3-201ENST00000527151 707 ntBASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.11■□□□□ 0.65
HERPUD2Q9BSE4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 AL355075.4-201ENST00000554988 638 ntBASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 AP000525.1-201ENST00000608286 694 ntBASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HERPUD2Q9BSE4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HERPUD2Q9BSE4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.09■□□□□ 0.65
HERPUD2Q9BSE4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.09■□□□□ 0.65
HERPUD2Q9BSE4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERPUD2Q9BSE4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERPUD2Q9BSE4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.09■□□□□ 0.65
HERPUD2Q9BSE4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.09■□□□□ 0.65
HERPUD2Q9BSE4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERPUD2Q9BSE4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.09■□□□□ 0.65
HERPUD2Q9BSE4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms