Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 AC007322.1-201ENST00000426983 750 ntBASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM4Q8WVI0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
SMIM4Q8WVI0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM4Q8WVI0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms