Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM41Q8WV44 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC31.53■■■□□ 2.64
TRIM41Q8WV44 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM41Q8WV44 NFYC-AS1-201ENST00000606277 1687 ntBASIC31.53■■■□□ 2.64
TRIM41Q8WV44 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM41Q8WV44 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM41Q8WV44 MTMR9LP-203ENST00000426597 1545 ntBASIC31.53■■■□□ 2.64
TRIM41Q8WV44 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM41Q8WV44 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
TRIM41Q8WV44 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC31.53■■■□□ 2.64
TRIM41Q8WV44 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 GRAMD4P1-201ENST00000435181 1110 ntBASIC31.52■■■□□ 2.64
TRIM41Q8WV44 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 ZNF259P1-201ENST00000407656 1365 ntBASIC31.52■■■□□ 2.64
TRIM41Q8WV44 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC31.52■■■□□ 2.64
TRIM41Q8WV44 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
TRIM41Q8WV44 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.64
TRIM41Q8WV44 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
TRIM41Q8WV44 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
TRIM41Q8WV44 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC31.51■■■□□ 2.64
TRIM41Q8WV44 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC31.51■■■□□ 2.64
TRIM41Q8WV44 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 KRT18P23-201ENST00000435622 1283 ntBASIC31.51■■■□□ 2.63
TRIM41Q8WV44 FIS1-203ENST00000442303 631 ntTSL 3 BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 CIB2-208ENST00000560618 804 ntTSL 2 BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TRIM41Q8WV44 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 HOXB1-202ENST00000577092 1414 ntBASIC31.5■■■□□ 2.63
TRIM41Q8WV44 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 AL357033.4-201ENST00000617703 1807 ntBASIC31.5■■■□□ 2.63
TRIM41Q8WV44 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 METTL21AP1-201ENST00000438852 635 ntBASIC31.5■■■□□ 2.63
TRIM41Q8WV44 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 AC006333.2-201ENST00000607957 2099 ntBASIC31.5■■■□□ 2.63
TRIM41Q8WV44 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
TRIM41Q8WV44 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 USP39-202ENST00000409025 1946 ntTSL 5 BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 AC007274.1-201ENST00000439805 662 ntBASIC31.49■■■□□ 2.63
TRIM41Q8WV44 TOB2P1-201ENST00000469761 992 ntBASIC31.49■■■□□ 2.63
TRIM41Q8WV44 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM41Q8WV44 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms