Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CHD6Q8TD26 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD6Q8TD26 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
CHD6Q8TD26 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD6Q8TD26 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD6Q8TD26 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.52■□□□□ 0.24
CHD6Q8TD26 GPR182-203ENST00000622922 591 ntBASIC16.52■□□□□ 0.24
CHD6Q8TD26 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CHD6Q8TD26 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD6Q8TD26 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD6Q8TD26 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.52■□□□□ 0.24
CHD6Q8TD26 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHD6Q8TD26 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CHD6Q8TD26 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD6Q8TD26 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD6Q8TD26 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD6Q8TD26 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD6Q8TD26 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD6Q8TD26 AC092658.1-201ENST00000505836 891 ntBASIC16.52■□□□□ 0.23
CHD6Q8TD26 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.52■□□□□ 0.23
CHD6Q8TD26 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD6Q8TD26 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.52■□□□□ 0.23
CHD6Q8TD26 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHD6Q8TD26 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHD6Q8TD26 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD6Q8TD26 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 AC003669.1-201ENST00000334569 611 ntBASIC16.51■□□□□ 0.23
CHD6Q8TD26 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHD6Q8TD26 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 AL162274.1-201ENST00000617191 1098 ntBASIC16.51■□□□□ 0.23
CHD6Q8TD26 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD6Q8TD26 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD6Q8TD26 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD6Q8TD26 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD6Q8TD26 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 AC009093.7-201ENST00000623853 1223 ntBASIC16.51■□□□□ 0.23
CHD6Q8TD26 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHD6Q8TD26 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD6Q8TD26 AC104417.2-201ENST00000562989 1793 ntBASIC16.51■□□□□ 0.23
CHD6Q8TD26 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHD6Q8TD26 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD6Q8TD26 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHD6Q8TD26 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 AC092552.1-201ENST00000547243 906 ntBASIC16.5■□□□□ 0.23
CHD6Q8TD26 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD6Q8TD26 AC006504.4-201ENST00000592118 1568 ntBASIC16.5■□□□□ 0.23
CHD6Q8TD26 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD6Q8TD26 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD6Q8TD26 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD6Q8TD26 CRYGEP-201ENST00000412192 528 ntBASIC16.5■□□□□ 0.23
CHD6Q8TD26 IGLL3P-201ENST00000412472 434 ntBASIC16.5■□□□□ 0.23
CHD6Q8TD26 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD6Q8TD26 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHD6Q8TD26 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD6Q8TD26 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.49■□□□□ 0.23
CHD6Q8TD26 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 AC092933.1-201ENST00000393644 945 ntBASIC16.49■□□□□ 0.23
CHD6Q8TD26 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD6Q8TD26 MIR4538-201ENST00000581377 78 ntBASIC16.49■□□□□ 0.23
CHD6Q8TD26 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 AL024507.2-201ENST00000606070 2574 ntBASIC16.49■□□□□ 0.23
CHD6Q8TD26 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD6Q8TD26 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD6Q8TD26 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 PLK5-205ENST00000642079 1969 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms