Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.32■□□□□ 0.2
DYNC2LI1Q8TCX1 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.32■□□□□ 0.2
DYNC2LI1Q8TCX1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.32■□□□□ 0.2
DYNC2LI1Q8TCX1 AL513477.1-201ENST00000602865 2407 ntBASIC16.32■□□□□ 0.2
DYNC2LI1Q8TCX1 AL357033.4-201ENST00000617703 1807 ntBASIC16.32■□□□□ 0.2
DYNC2LI1Q8TCX1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.32■□□□□ 0.2
DYNC2LI1Q8TCX1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
DYNC2LI1Q8TCX1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
DYNC2LI1Q8TCX1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.32■□□□□ 0.2
DYNC2LI1Q8TCX1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DYNC2LI1Q8TCX1 AC106886.4-201ENST00000623557 2502 ntBASIC16.32■□□□□ 0.2
DYNC2LI1Q8TCX1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 AP006587.1-201ENST00000534129 1502 ntBASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 AL589743.5-201ENST00000616611 1050 ntBASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DYNC2LI1Q8TCX1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 AL138688.1-201ENST00000624851 1594 ntBASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 KRT8P32-201ENST00000512863 1461 ntBASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 MST1L-201ENST00000442552 2185 ntBASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 CROCCP2-202ENST00000412962 2773 ntBASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 FLJ38576-201ENST00000623820 2459 ntBASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.3■□□□□ 0.2
DYNC2LI1Q8TCX1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 KRT19P1-201ENST00000405746 1186 ntBASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 MYLKP1-201ENST00000509077 1580 ntBASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DYNC2LI1Q8TCX1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms