Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC28.78■■■□□ 2.2
CFAP43Q8NDM7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP43Q8NDM7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP43Q8NDM7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP43Q8NDM7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP43Q8NDM7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP43Q8NDM7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC28.78■■■□□ 2.2
CFAP43Q8NDM7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC28.78■■■□□ 2.2
CFAP43Q8NDM7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP43Q8NDM7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP43Q8NDM7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 LINC02084-201ENST00000606069 1096 ntBASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 MIR149-201ENST00000384879 89 ntBASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC28.77■■■□□ 2.2
CFAP43Q8NDM7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC28.76■■■□□ 2.2
CFAP43Q8NDM7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 UPF3AP3-201ENST00000420996 769 ntBASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 SCARNA2-201ENST00000458748 420 ntBASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC28.76■■■□□ 2.19
CFAP43Q8NDM7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
CFAP43Q8NDM7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC28.75■■■□□ 2.19
CFAP43Q8NDM7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CFAP43Q8NDM7 AC096582.2-201ENST00000510860 516 ntBASIC28.75■■■□□ 2.19
CFAP43Q8NDM7 AP001160.2-201ENST00000596071 487 ntBASIC28.75■■■□□ 2.19
CFAP43Q8NDM7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC28.75■■■□□ 2.19
CFAP43Q8NDM7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC28.75■■■□□ 2.19
CFAP43Q8NDM7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CFAP43Q8NDM7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CFAP43Q8NDM7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 FGFR3P6-201ENST00000457012 610 ntBASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 NMU-202ENST00000505262 693 ntTSL 3 BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 AC114341.1-201ENST00000618070 349 ntBASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 AL024508.2-201ENST00000607749 1894 ntBASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 HES2-202ENST00000377836 507 ntTSL 2 BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 AC027796.2-201ENST00000575326 344 ntBASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP43Q8NDM7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 ZNF259P1-201ENST00000407656 1365 ntBASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 RPSAP43-201ENST00000402237 625 ntBASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 POM121L3P-201ENST00000419331 1163 ntBASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 GPX1P2-201ENST00000429271 606 ntBASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC28.73■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms