Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.56■□□□□ 0.88
USP38Q8NB14 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
USP38Q8NB14 TSPY18P-201ENST00000441642 509 ntBASIC20.56■□□□□ 0.88
USP38Q8NB14 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.56■□□□□ 0.88
USP38Q8NB14 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
USP38Q8NB14 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.56■□□□□ 0.88
USP38Q8NB14 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP38Q8NB14 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.56■□□□□ 0.88
USP38Q8NB14 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
USP38Q8NB14 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP38Q8NB14 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP38Q8NB14 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.56■□□□□ 0.88
USP38Q8NB14 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.56■□□□□ 0.88
USP38Q8NB14 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.56■□□□□ 0.88
USP38Q8NB14 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP38Q8NB14 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.56■□□□□ 0.88
USP38Q8NB14 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP38Q8NB14 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP38Q8NB14 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP38Q8NB14 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.55■□□□□ 0.88
USP38Q8NB14 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.55■□□□□ 0.88
USP38Q8NB14 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP38Q8NB14 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP38Q8NB14 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.55■□□□□ 0.88
USP38Q8NB14 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
USP38Q8NB14 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP38Q8NB14 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.55■□□□□ 0.88
USP38Q8NB14 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP38Q8NB14 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP38Q8NB14 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP38Q8NB14 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.55■□□□□ 0.88
USP38Q8NB14 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.55■□□□□ 0.88
USP38Q8NB14 HMGN1P19-201ENST00000436976 333 ntBASIC20.55■□□□□ 0.88
USP38Q8NB14 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.55■□□□□ 0.88
USP38Q8NB14 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.55■□□□□ 0.88
USP38Q8NB14 MIR3917-201ENST00000580971 93 ntBASIC20.55■□□□□ 0.88
USP38Q8NB14 AL121672.3-201ENST00000608644 468 ntBASIC20.55■□□□□ 0.88
USP38Q8NB14 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.55■□□□□ 0.88
USP38Q8NB14 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.55■□□□□ 0.88
USP38Q8NB14 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.55■□□□□ 0.88
USP38Q8NB14 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP38Q8NB14 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP38Q8NB14 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
USP38Q8NB14 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP38Q8NB14 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.55■□□□□ 0.88
USP38Q8NB14 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.55■□□□□ 0.88
USP38Q8NB14 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.55■□□□□ 0.88
USP38Q8NB14 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP38Q8NB14 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP38Q8NB14 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
USP38Q8NB14 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP38Q8NB14 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
USP38Q8NB14 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.54■□□□□ 0.88
USP38Q8NB14 HLA-F-220ENST00000434407 884 ntBASIC20.54■□□□□ 0.88
USP38Q8NB14 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
USP38Q8NB14 BX276092.5-203ENST00000456199 560 ntBASIC20.54■□□□□ 0.88
USP38Q8NB14 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
USP38Q8NB14 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.54■□□□□ 0.88
USP38Q8NB14 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
USP38Q8NB14 AP002414.4-201ENST00000589764 1148 ntBASIC20.54■□□□□ 0.88
USP38Q8NB14 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.54■□□□□ 0.88
USP38Q8NB14 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.54■□□□□ 0.88
USP38Q8NB14 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
USP38Q8NB14 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
USP38Q8NB14 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.54■□□□□ 0.88
USP38Q8NB14 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP38Q8NB14 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP38Q8NB14 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP38Q8NB14 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP38Q8NB14 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
USP38Q8NB14 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.53■□□□□ 0.88
USP38Q8NB14 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
USP38Q8NB14 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
USP38Q8NB14 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.53■□□□□ 0.88
USP38Q8NB14 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
USP38Q8NB14 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.53■□□□□ 0.88
USP38Q8NB14 AC120498.9-201ENST00000339021 3867 ntBASIC20.53■□□□□ 0.88
USP38Q8NB14 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
USP38Q8NB14 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.53■□□□□ 0.88
USP38Q8NB14 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.53■□□□□ 0.88
USP38Q8NB14 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.53■□□□□ 0.88
USP38Q8NB14 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.53■□□□□ 0.88
USP38Q8NB14 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
USP38Q8NB14 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP38Q8NB14 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
USP38Q8NB14 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms