Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 AL591424.1-201ENST00000442569 1213 ntBASIC14.4□□□□□ -0.1
C3orf56Q8N813 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 AC018712.1-201ENST00000455767 687 ntBASIC14.4□□□□□ -0.1
C3orf56Q8N813 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 MIR3180-4-201ENST00000582223 153 ntBASIC14.4□□□□□ -0.1
C3orf56Q8N813 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 FAM197Y3-203ENST00000618346 717 ntBASIC14.4□□□□□ -0.1
C3orf56Q8N813 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 AL691432.2-201ENST00000607222 2038 ntBASIC14.4□□□□□ -0.1
C3orf56Q8N813 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 RCC2P3-201ENST00000418112 1537 ntBASIC14.4□□□□□ -0.1
C3orf56Q8N813 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C3orf56Q8N813 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 AC104109.2-201ENST00000602919 1418 ntBASIC14.4□□□□□ -0.1
C3orf56Q8N813 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
C3orf56Q8N813 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
C3orf56Q8N813 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.4□□□□□ -0.11
C3orf56Q8N813 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 AC091607.1-201ENST00000490318 1060 ntBASIC14.39□□□□□ -0.11
C3orf56Q8N813 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 AL356488.2-201ENST00000602755 427 ntBASIC14.39□□□□□ -0.11
C3orf56Q8N813 AC114341.1-201ENST00000618070 349 ntBASIC14.39□□□□□ -0.11
C3orf56Q8N813 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 AC008556.1-201ENST00000610908 2040 ntBASIC14.39□□□□□ -0.11
C3orf56Q8N813 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C3orf56Q8N813 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.39□□□□□ -0.11
C3orf56Q8N813 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C3orf56Q8N813 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C3orf56Q8N813 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C3orf56Q8N813 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C3orf56Q8N813 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C3orf56Q8N813 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C3orf56Q8N813 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C3orf56Q8N813 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C3orf56Q8N813 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C3orf56Q8N813 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C3orf56Q8N813 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms