Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A3Q8N4M1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SLC44A3Q8N4M1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC44A3Q8N4M1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC44A3Q8N4M1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.83■□□□□ 0.61
SLC44A3Q8N4M1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 AL163051.1-201ENST00000569214 1512 ntBASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A3Q8N4M1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 PGAM5P1-201ENST00000518923 814 ntBASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 AC005336.2-201ENST00000593183 939 ntBASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A3Q8N4M1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms