Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.71■□□□□ 0.59
PGBD3Q8N328 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.71■□□□□ 0.59
PGBD3Q8N328 FDX1P1-201ENST00000449115 551 ntBASIC18.71■□□□□ 0.59
PGBD3Q8N328 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.71■□□□□ 0.59
PGBD3Q8N328 EMBP1-201ENST00000458200 901 ntBASIC18.71■□□□□ 0.59
PGBD3Q8N328 AC104819.1-201ENST00000504587 486 ntBASIC18.71■□□□□ 0.59
PGBD3Q8N328 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD3Q8N328 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.71■□□□□ 0.59
PGBD3Q8N328 AC005332.3-201ENST00000589904 676 ntBASIC18.71■□□□□ 0.59
PGBD3Q8N328 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.71■□□□□ 0.59
PGBD3Q8N328 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PGBD3Q8N328 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD3Q8N328 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD3Q8N328 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD3Q8N328 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD3Q8N328 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.71■□□□□ 0.59
PGBD3Q8N328 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD3Q8N328 AP000974.1-201ENST00000623909 2387 ntBASIC18.71■□□□□ 0.59
PGBD3Q8N328 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD3Q8N328 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD3Q8N328 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD3Q8N328 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD3Q8N328 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PGBD3Q8N328 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PGBD3Q8N328 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PGBD3Q8N328 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PGBD3Q8N328 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.7■□□□□ 0.58
PGBD3Q8N328 AC012615.1-201ENST00000565797 1299 ntBASIC18.7■□□□□ 0.58
PGBD3Q8N328 HOXB1-202ENST00000577092 1414 ntBASIC18.7■□□□□ 0.58
PGBD3Q8N328 AC090616.6-201ENST00000582640 721 ntBASIC18.7■□□□□ 0.58
PGBD3Q8N328 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.7■□□□□ 0.58
PGBD3Q8N328 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PGBD3Q8N328 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.7■□□□□ 0.58
PGBD3Q8N328 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD3Q8N328 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 TSPY19P-201ENST00000418461 509 ntBASIC18.69■□□□□ 0.58
PGBD3Q8N328 TSPY18P-201ENST00000441642 509 ntBASIC18.69■□□□□ 0.58
PGBD3Q8N328 KRT17P6-201ENST00000453795 1220 ntBASIC18.69■□□□□ 0.58
PGBD3Q8N328 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 AC034236.2-201ENST00000606662 1610 ntBASIC18.69■□□□□ 0.58
PGBD3Q8N328 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD3Q8N328 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD3Q8N328 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
PGBD3Q8N328 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD3Q8N328 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PGBD3Q8N328 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD3Q8N328 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD3Q8N328 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD3Q8N328 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD3Q8N328 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.68■□□□□ 0.58
PGBD3Q8N328 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.68■□□□□ 0.58
PGBD3Q8N328 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD3Q8N328 AC074051.2-201ENST00000565115 352 ntBASIC18.68■□□□□ 0.58
PGBD3Q8N328 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.68■□□□□ 0.58
PGBD3Q8N328 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PGBD3Q8N328 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.68■□□□□ 0.58
PGBD3Q8N328 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms