Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC124864.1-201ENST00000623408 392 ntBASIC19.5■□□□□ 0.71
VARS2Q5ST30 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.5■□□□□ 0.71
VARS2Q5ST30 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
VARS2Q5ST30 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VARS2Q5ST30 AL499627.1-201ENST00000569373 2188 ntBASIC19.5■□□□□ 0.71
VARS2Q5ST30 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
VARS2Q5ST30 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 AC233702.3-201ENST00000578656 1387 ntBASIC19.49■□□□□ 0.71
VARS2Q5ST30 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 AC104819.1-201ENST00000504587 486 ntBASIC19.49■□□□□ 0.71
VARS2Q5ST30 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 AC004263.2-201ENST00000617183 678 ntBASIC19.49■□□□□ 0.71
VARS2Q5ST30 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.49■□□□□ 0.71
VARS2Q5ST30 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VARS2Q5ST30 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VARS2Q5ST30 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.48■□□□□ 0.71
VARS2Q5ST30 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 TSPY19P-201ENST00000418461 509 ntBASIC19.48■□□□□ 0.71
VARS2Q5ST30 TSPY18P-201ENST00000441642 509 ntBASIC19.48■□□□□ 0.71
VARS2Q5ST30 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.48■□□□□ 0.71
VARS2Q5ST30 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.48■□□□□ 0.71
VARS2Q5ST30 AC074051.2-201ENST00000565115 352 ntBASIC19.48■□□□□ 0.71
VARS2Q5ST30 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
VARS2Q5ST30 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 LINC00167-201ENST00000530583 1419 ntBASIC19.48■□□□□ 0.71
VARS2Q5ST30 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
VARS2Q5ST30 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.48■□□□□ 0.71
VARS2Q5ST30 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARS2Q5ST30 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 SDHAP2-201ENST00000455183 2001 ntBASIC19.47■□□□□ 0.71
VARS2Q5ST30 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
VARS2Q5ST30 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.47■□□□□ 0.71
VARS2Q5ST30 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.47■□□□□ 0.71
VARS2Q5ST30 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.47■□□□□ 0.71
VARS2Q5ST30 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VARS2Q5ST30 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VARS2Q5ST30 FOSL1P1-201ENST00000511041 816 ntBASIC19.47■□□□□ 0.71
VARS2Q5ST30 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.47■□□□□ 0.71
VARS2Q5ST30 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.47■□□□□ 0.71
VARS2Q5ST30 AL732292.2-201ENST00000609649 430 ntBASIC19.47■□□□□ 0.71
VARS2Q5ST30 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.47■□□□□ 0.71
VARS2Q5ST30 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.47■□□□□ 0.71
VARS2Q5ST30 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.47■□□□□ 0.71
VARS2Q5ST30 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARS2Q5ST30 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms