Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 AP003071.4-201ENST00000562276 1284 ntBASIC17.8■□□□□ 0.44
HMGCS1Q01581 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCS1Q01581 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCS1Q01581 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCS1Q01581 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCS1Q01581 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCS1Q01581 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCS1Q01581 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
HMGCS1Q01581 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCS1Q01581 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCS1Q01581 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCS1Q01581 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCS1Q01581 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCS1Q01581 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCS1Q01581 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.78■□□□□ 0.44
HMGCS1Q01581 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCS1Q01581 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCS1Q01581 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCS1Q01581 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCS1Q01581 CA15P1-201ENST00000481698 905 ntBASIC17.78■□□□□ 0.44
HMGCS1Q01581 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCS1Q01581 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCS1Q01581 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.78■□□□□ 0.44
HMGCS1Q01581 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.78■□□□□ 0.44
HMGCS1Q01581 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.78■□□□□ 0.44
HMGCS1Q01581 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCS1Q01581 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCS1Q01581 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCS1Q01581 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCS1Q01581 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 AC034236.2-201ENST00000606662 1610 ntBASIC17.77■□□□□ 0.44
HMGCS1Q01581 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCS1Q01581 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.77■□□□□ 0.44
HMGCS1Q01581 KRT8P50-201ENST00000562022 1438 ntBASIC17.77■□□□□ 0.44
HMGCS1Q01581 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HMGCS1Q01581 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms