Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.23■□□□□ 0.51
CDKN2DP55273 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKN2DP55273 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
CDKN2DP55273 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKN2DP55273 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDKN2DP55273 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.23■□□□□ 0.51
CDKN2DP55273 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKN2DP55273 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.23■□□□□ 0.51
CDKN2DP55273 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDKN2DP55273 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDKN2DP55273 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKN2DP55273 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.22■□□□□ 0.51
CDKN2DP55273 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDKN2DP55273 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKN2DP55273 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDKN2DP55273 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKN2DP55273 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDKN2DP55273 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.22■□□□□ 0.51
CDKN2DP55273 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDKN2DP55273 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.22■□□□□ 0.51
CDKN2DP55273 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDKN2DP55273 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDKN2DP55273 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.22■□□□□ 0.51
CDKN2DP55273 AC010947.1-201ENST00000623454 693 ntBASIC18.22■□□□□ 0.51
CDKN2DP55273 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKN2DP55273 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CDKN2DP55273 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKN2DP55273 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2DP55273 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CDKN2DP55273 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKN2DP55273 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CDKN2DP55273 AC026471.1-201ENST00000564629 3026 ntBASIC18.21■□□□□ 0.51
CDKN2DP55273 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKN2DP55273 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKN2DP55273 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKN2DP55273 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKN2DP55273 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKN2DP55273 EGLN1P1-201ENST00000531623 762 ntBASIC18.21■□□□□ 0.51
CDKN2DP55273 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKN2DP55273 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDKN2DP55273 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKN2DP55273 AC067852.2-201ENST00000590513 2313 ntBASIC18.21■□□□□ 0.51
CDKN2DP55273 GMCL1P1-201ENST00000463439 1581 ntBASIC18.21■□□□□ 0.51
CDKN2DP55273 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2DP55273 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CDKN2DP55273 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKN2DP55273 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDKN2DP55273 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDKN2DP55273 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.2■□□□□ 0.5
CDKN2DP55273 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDKN2DP55273 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKN2DP55273 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.2■□□□□ 0.5
CDKN2DP55273 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 AC008764.6-201ENST00000595909 2069 ntBASIC18.2■□□□□ 0.5
CDKN2DP55273 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDKN2DP55273 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
CDKN2DP55273 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.2■□□□□ 0.5
CDKN2DP55273 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.2■□□□□ 0.5
CDKN2DP55273 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKN2DP55273 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKN2DP55273 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms