Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSP1P33241 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LSP1P33241 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
LSP1P33241 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSP1P33241 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LSP1P33241 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LSP1P33241 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSP1P33241 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LSP1P33241 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LSP1P33241 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.52■□□□□ 0.56
LSP1P33241 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.52■□□□□ 0.56
LSP1P33241 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.52■□□□□ 0.56
LSP1P33241 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LSP1P33241 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
LSP1P33241 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LSP1P33241 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LSP1P33241 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
LSP1P33241 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LSP1P33241 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
LSP1P33241 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.52■□□□□ 0.55
LSP1P33241 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LSP1P33241 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LSP1P33241 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LSP1P33241 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
LSP1P33241 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.52■□□□□ 0.55
LSP1P33241 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.55
LSP1P33241 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LSP1P33241 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
LSP1P33241 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LSP1P33241 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 AC068338.2-201ENST00000563278 1430 ntBASIC18.51■□□□□ 0.55
LSP1P33241 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LSP1P33241 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.51■□□□□ 0.55
LSP1P33241 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.51■□□□□ 0.55
LSP1P33241 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 GPX1P1-201ENST00000388829 606 ntBASIC18.51■□□□□ 0.55
LSP1P33241 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LSP1P33241 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.51■□□□□ 0.55
LSP1P33241 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.51■□□□□ 0.55
LSP1P33241 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.51■□□□□ 0.55
LSP1P33241 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
LSP1P33241 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LSP1P33241 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSP1P33241 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LSP1P33241 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LSP1P33241 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSP1P33241 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSP1P33241 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LSP1P33241 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LSP1P33241 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
LSP1P33241 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LSP1P33241 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LSP1P33241 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.5■□□□□ 0.55
LSP1P33241 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.5■□□□□ 0.55
LSP1P33241 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSP1P33241 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSP1P33241 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSP1P33241 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.5■□□□□ 0.55
LSP1P33241 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.5■□□□□ 0.55
LSP1P33241 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSP1P33241 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSP1P33241 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSP1P33241 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LSP1P33241 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSP1P33241 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSP1P33241 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSP1P33241 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 AL357033.4-201ENST00000617703 1807 ntBASIC18.49■□□□□ 0.55
LSP1P33241 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.49■□□□□ 0.55
LSP1P33241 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
LSP1P33241 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.49■□□□□ 0.55
LSP1P33241 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
LSP1P33241 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms