Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB3P28472 PHGDH-209ENST00000641074 1780 ntBASIC18.34■□□□□ 0.53
GABRB3P28472 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRB3P28472 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GABRB3P28472 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GABRB3P28472 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GABRB3P28472 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB3P28472 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GABRB3P28472 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
GABRB3P28472 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GABRB3P28472 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GABRB3P28472 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GABRB3P28472 HOXB1-202ENST00000577092 1414 ntBASIC18.33■□□□□ 0.53
GABRB3P28472 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GABRB3P28472 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
GABRB3P28472 AC138028.4-201ENST00000564984 1845 ntBASIC18.33■□□□□ 0.53
GABRB3P28472 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.33■□□□□ 0.53
GABRB3P28472 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GABRB3P28472 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRB3P28472 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRB3P28472 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
GABRB3P28472 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.33■□□□□ 0.52
GABRB3P28472 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRB3P28472 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.33■□□□□ 0.52
GABRB3P28472 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRB3P28472 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GABRB3P28472 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRB3P28472 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRB3P28472 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRB3P28472 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRB3P28472 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GABRB3P28472 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GABRB3P28472 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GABRB3P28472 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB3P28472 AC020916.1-201ENST00000587762 1774 ntBASIC18.32■□□□□ 0.52
GABRB3P28472 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB3P28472 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB3P28472 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB3P28472 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB3P28472 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB3P28472 AL096828.2-201ENST00000567259 1965 ntBASIC18.32■□□□□ 0.52
GABRB3P28472 AP000997.3-201ENST00000623333 2250 ntBASIC18.32■□□□□ 0.52
GABRB3P28472 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB3P28472 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.32■□□□□ 0.52
GABRB3P28472 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.32■□□□□ 0.52
GABRB3P28472 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
GABRB3P28472 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.32■□□□□ 0.52
GABRB3P28472 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB3P28472 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.32■□□□□ 0.52
GABRB3P28472 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB3P28472 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB3P28472 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GABRB3P28472 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB3P28472 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.32■□□□□ 0.52
GABRB3P28472 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.32■□□□□ 0.52
GABRB3P28472 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GABRB3P28472 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GABRB3P28472 KRT8P9-201ENST00000558927 1449 ntBASIC18.32■□□□□ 0.52
GABRB3P28472 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.31■□□□□ 0.52
GABRB3P28472 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRB3P28472 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GABRB3P28472 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.31■□□□□ 0.52
GABRB3P28472 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRB3P28472 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.31■□□□□ 0.52
GABRB3P28472 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.31■□□□□ 0.52
GABRB3P28472 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.31■□□□□ 0.52
GABRB3P28472 GMCL1P1-201ENST00000463439 1581 ntBASIC18.31■□□□□ 0.52
GABRB3P28472 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRB3P28472 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRB3P28472 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRB3P28472 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
GABRB3P28472 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.31■□□□□ 0.52
GABRB3P28472 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRB3P28472 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.31■□□□□ 0.52
GABRB3P28472 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRB3P28472 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GABRB3P28472 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.31■□□□□ 0.52
GABRB3P28472 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
GABRB3P28472 CYP2D8P-201ENST00000433633 1490 ntBASIC18.31■□□□□ 0.52
GABRB3P28472 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRB3P28472 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
GABRB3P28472 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
GABRB3P28472 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GABRB3P28472 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.3■□□□□ 0.52
GABRB3P28472 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.3■□□□□ 0.52
GABRB3P28472 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 KRT18P23-201ENST00000435622 1283 ntBASIC18.3■□□□□ 0.52
GABRB3P28472 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms