Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 MIR149-201ENST00000384879 89 ntBASIC15.9■□□□□ 0.14
CD40P25942 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.9■□□□□ 0.14
CD40P25942 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.9■□□□□ 0.14
CD40P25942 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
CD40P25942 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.9■□□□□ 0.14
CD40P25942 AC005332.3-201ENST00000589904 676 ntBASIC15.9■□□□□ 0.14
CD40P25942 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.9■□□□□ 0.14
CD40P25942 NPAP1P7-201ENST00000613027 823 ntBASIC15.9■□□□□ 0.14
CD40P25942 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.9■□□□□ 0.14
CD40P25942 MYLKP1-201ENST00000509077 1580 ntBASIC15.9■□□□□ 0.14
CD40P25942 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 Z83836.1-201ENST00000624605 1642 ntBASIC15.9■□□□□ 0.14
CD40P25942 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CD40P25942 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CD40P25942 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CD40P25942 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CD40P25942 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CD40P25942 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.89■□□□□ 0.13
CD40P25942 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.89■□□□□ 0.13
CD40P25942 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.89■□□□□ 0.13
CD40P25942 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.89■□□□□ 0.13
CD40P25942 AC092119.3-201ENST00000612618 583 ntBASIC15.89■□□□□ 0.13
CD40P25942 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.89■□□□□ 0.13
CD40P25942 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CD40P25942 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD40P25942 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CD40P25942 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CD40P25942 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CD40P25942 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CD40P25942 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CD40P25942 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CD40P25942 CHCHD2P8-201ENST00000429873 447 ntBASIC15.88■□□□□ 0.13
CD40P25942 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.88■□□□□ 0.13
CD40P25942 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.88■□□□□ 0.13
CD40P25942 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.88■□□□□ 0.13
CD40P25942 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.88■□□□□ 0.13
CD40P25942 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.88■□□□□ 0.13
CD40P25942 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.88■□□□□ 0.13
CD40P25942 AC092329.2-201ENST00000598402 547 ntBASIC15.88■□□□□ 0.13
CD40P25942 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CD40P25942 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 AC009102.3-201ENST00000623118 1491 ntBASIC15.88■□□□□ 0.13
CD40P25942 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.88■□□□□ 0.13
CD40P25942 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CD40P25942 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD40P25942 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.87■□□□□ 0.13
CD40P25942 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.87■□□□□ 0.13
CD40P25942 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.87■□□□□ 0.13
CD40P25942 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CD40P25942 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.87■□□□□ 0.13
CD40P25942 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CD40P25942 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CD40P25942 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms