Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.54■■□□□ 1.2
KCNA3P22001 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
KCNA3P22001 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
KCNA3P22001 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.54■■□□□ 1.2
KCNA3P22001 AL139288.1-201ENST00000623748 933 ntBASIC22.54■■□□□ 1.2
KCNA3P22001 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.54■■□□□ 1.2
KCNA3P22001 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
KCNA3P22001 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.54■■□□□ 1.2
KCNA3P22001 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
KCNA3P22001 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
KCNA3P22001 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.53■■□□□ 1.2
KCNA3P22001 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
KCNA3P22001 MTCL1P1-201ENST00000446207 792 ntBASIC22.53■■□□□ 1.2
KCNA3P22001 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC22.53■■□□□ 1.2
KCNA3P22001 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
KCNA3P22001 YBX1P5-201ENST00000509441 847 ntBASIC22.53■■□□□ 1.2
KCNA3P22001 KRT18P41-201ENST00000518924 1277 ntBASIC22.53■■□□□ 1.2
KCNA3P22001 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC22.53■■□□□ 1.2
KCNA3P22001 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.53■■□□□ 1.2
KCNA3P22001 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.53■■□□□ 1.2
KCNA3P22001 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
KCNA3P22001 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
KCNA3P22001 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
KCNA3P22001 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
KCNA3P22001 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.53■■□□□ 1.2
KCNA3P22001 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
KCNA3P22001 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
KCNA3P22001 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.52■■□□□ 1.2
KCNA3P22001 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNA3P22001 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNA3P22001 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KCNA3P22001 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNA3P22001 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.52■■□□□ 1.2
KCNA3P22001 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
KCNA3P22001 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
KCNA3P22001 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.52■■□□□ 1.2
KCNA3P22001 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.52■■□□□ 1.2
KCNA3P22001 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
KCNA3P22001 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.52■■□□□ 1.2
KCNA3P22001 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.52■■□□□ 1.2
KCNA3P22001 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KCNA3P22001 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.52■■□□□ 1.2
KCNA3P22001 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNA3P22001 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22.52■■□□□ 1.19
KCNA3P22001 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22.52■■□□□ 1.19
KCNA3P22001 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
KCNA3P22001 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNA3P22001 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
KCNA3P22001 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
KCNA3P22001 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNA3P22001 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
KCNA3P22001 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
KCNA3P22001 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNA3P22001 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC22.51■■□□□ 1.19
KCNA3P22001 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.51■■□□□ 1.19
KCNA3P22001 HTR5BP-201ENST00000430851 1154 ntBASIC22.51■■□□□ 1.19
KCNA3P22001 KRT18P2-201ENST00000447938 1258 ntBASIC22.51■■□□□ 1.19
KCNA3P22001 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.51■■□□□ 1.19
KCNA3P22001 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC22.51■■□□□ 1.19
KCNA3P22001 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.51■■□□□ 1.19
KCNA3P22001 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.51■■□□□ 1.19
KCNA3P22001 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
KCNA3P22001 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.51■■□□□ 1.19
KCNA3P22001 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNA3P22001 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.5■■□□□ 1.19
KCNA3P22001 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.5■■□□□ 1.19
KCNA3P22001 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNA3P22001 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
KCNA3P22001 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
KCNA3P22001 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNA3P22001 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
KCNA3P22001 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNA3P22001 MCCD1P2-201ENST00000423228 335 ntBASIC22.5■■□□□ 1.19
KCNA3P22001 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNA3P22001 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.5■■□□□ 1.19
KCNA3P22001 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.5■■□□□ 1.19
KCNA3P22001 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms