Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD9O15198 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD9O15198 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 AC005521.1-201ENST00000393351 872 ntBASIC16.75■□□□□ 0.27
SMAD9O15198 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD9O15198 AL137013.1-201ENST00000432946 1228 ntBASIC16.75■□□□□ 0.27
SMAD9O15198 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
SMAD9O15198 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.75■□□□□ 0.27
SMAD9O15198 MIR3180-5-201ENST00000583743 153 ntBASIC16.75■□□□□ 0.27
SMAD9O15198 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD9O15198 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.75■□□□□ 0.27
SMAD9O15198 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.75■□□□□ 0.27
SMAD9O15198 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SMAD9O15198 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
SMAD9O15198 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SMAD9O15198 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.75■□□□□ 0.27
SMAD9O15198 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SMAD9O15198 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SMAD9O15198 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SMAD9O15198 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SMAD9O15198 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SMAD9O15198 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SMAD9O15198 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SMAD9O15198 AC073508.3-201ENST00000619697 1419 ntBASIC16.74■□□□□ 0.27
SMAD9O15198 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.74■□□□□ 0.27
SMAD9O15198 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.74■□□□□ 0.27
SMAD9O15198 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SMAD9O15198 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.74■□□□□ 0.27
SMAD9O15198 LIN28AP1-201ENST00000429574 405 ntBASIC16.74■□□□□ 0.27
SMAD9O15198 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.74■□□□□ 0.27
SMAD9O15198 AL512604.3-201ENST00000569583 964 ntBASIC16.74■□□□□ 0.27
SMAD9O15198 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.74■□□□□ 0.27
SMAD9O15198 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
SMAD9O15198 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.74■□□□□ 0.27
SMAD9O15198 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 MTMR9LP-203ENST00000426597 1545 ntBASIC16.74■□□□□ 0.27
SMAD9O15198 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SMAD9O15198 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.74■□□□□ 0.27
SMAD9O15198 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SMAD9O15198 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD9O15198 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SMAD9O15198 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD9O15198 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.73■□□□□ 0.27
SMAD9O15198 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD9O15198 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD9O15198 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD9O15198 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.73■□□□□ 0.27
SMAD9O15198 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.73■□□□□ 0.27
SMAD9O15198 KRT18P57-201ENST00000443599 1254 ntBASIC16.73■□□□□ 0.27
SMAD9O15198 ATP5G1P1-201ENST00000448724 379 ntBASIC16.73■□□□□ 0.27
SMAD9O15198 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms