Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PIK3C2AO00443 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PIK3C2AO00443 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PIK3C2AO00443 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PIK3C2AO00443 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC24.68■■□□□ 1.54
PIK3C2AO00443 AC139887.3-201ENST00000568585 713 ntBASIC24.68■■□□□ 1.54
PIK3C2AO00443 AC064862.7-201ENST00000604520 867 ntBASIC24.68■■□□□ 1.54
PIK3C2AO00443 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PIK3C2AO00443 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC24.68■■□□□ 1.54
PIK3C2AO00443 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PIK3C2AO00443 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PIK3C2AO00443 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
PIK3C2AO00443 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC24.67■■□□□ 1.54
PIK3C2AO00443 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
PIK3C2AO00443 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PIK3C2AO00443 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PIK3C2AO00443 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PIK3C2AO00443 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC24.67■■□□□ 1.54
PIK3C2AO00443 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC24.67■■□□□ 1.54
PIK3C2AO00443 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC24.67■■□□□ 1.54
PIK3C2AO00443 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PIK3C2AO00443 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PIK3C2AO00443 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PIK3C2AO00443 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC24.67■■□□□ 1.54
PIK3C2AO00443 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PIK3C2AO00443 MYLKP1-201ENST00000509077 1580 ntBASIC24.67■■□□□ 1.54
PIK3C2AO00443 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PIK3C2AO00443 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
PIK3C2AO00443 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PIK3C2AO00443 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 USP39-202ENST00000409025 1946 ntTSL 5 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 KRT18P58-201ENST00000527480 1120 ntBASIC24.66■■□□□ 1.54
PIK3C2AO00443 IRF8-202ENST00000562492 946 ntTSL 3 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PIK3C2AO00443 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PIK3C2AO00443 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PIK3C2AO00443 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PIK3C2AO00443 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PIK3C2AO00443 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PIK3C2AO00443 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PIK3C2AO00443 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PIK3C2AO00443 MED16-201ENST00000269814 1199 ntTSL 5 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PIK3C2AO00443 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC24.66■■□□□ 1.54
PIK3C2AO00443 AC073648.2-201ENST00000510116 352 ntBASIC24.66■■□□□ 1.54
PIK3C2AO00443 IGHV3-22-201ENST00000520721 359 ntBASIC24.66■■□□□ 1.54
PIK3C2AO00443 AC145285.3-201ENST00000564603 959 ntBASIC24.66■■□□□ 1.54
PIK3C2AO00443 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PIK3C2AO00443 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PIK3C2AO00443 LINC01126-201ENST00000623515 1646 ntBASIC24.65■■□□□ 1.54
PIK3C2AO00443 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PIK3C2AO00443 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC24.65■■□□□ 1.54
PIK3C2AO00443 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PIK3C2AO00443 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.65■■□□□ 1.54
PIK3C2AO00443 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
PIK3C2AO00443 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PIK3C2AO00443 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PIK3C2AO00443 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
PIK3C2AO00443 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PIK3C2AO00443 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PIK3C2AO00443 SCARNA2-201ENST00000458748 420 ntBASIC24.65■■□□□ 1.54
PIK3C2AO00443 AC106730.1-201ENST00000566722 1090 ntBASIC24.65■■□□□ 1.54
PIK3C2AO00443 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC24.65■■□□□ 1.54
PIK3C2AO00443 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC24.65■■□□□ 1.54
PIK3C2AO00443 AC009154.2-201ENST00000621177 724 ntBASIC24.65■■□□□ 1.54
PIK3C2AO00443 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PIK3C2AO00443 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PIK3C2AO00443 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PIK3C2AO00443 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
PIK3C2AO00443 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC24.64■■□□□ 1.54
PIK3C2AO00443 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PIK3C2AO00443 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.64■■□□□ 1.54
PIK3C2AO00443 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
PIK3C2AO00443 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PIK3C2AO00443 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC24.64■■□□□ 1.53
PIK3C2AO00443 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC24.64■■□□□ 1.53
PIK3C2AO00443 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC24.64■■□□□ 1.53
PIK3C2AO00443 AC068472.1-201ENST00000474589 881 ntBASIC24.64■■□□□ 1.53
PIK3C2AO00443 SART3-203ENST00000546611 1184 ntBASIC24.64■■□□□ 1.53
PIK3C2AO00443 AC011467.2-201ENST00000598425 242 ntBASIC24.64■■□□□ 1.53
PIK3C2AO00443 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
PIK3C2AO00443 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.53
PIK3C2AO00443 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PIK3C2AO00443 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PIK3C2AO00443 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PIK3C2AO00443 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
PIK3C2AO00443 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PIK3C2AO00443 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PIK3C2AO00443 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PIK3C2AO00443 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms