Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
EIF3FO00303 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.04■□□□□ 0.48
EIF3FO00303 AL356309.3-201ENST00000624132 1934 ntBASIC18.04■□□□□ 0.48
EIF3FO00303 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.04■□□□□ 0.48
EIF3FO00303 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 SLC25A3P1-201ENST00000443844 931 ntBASIC18.04■□□□□ 0.48
EIF3FO00303 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.04■□□□□ 0.48
EIF3FO00303 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
EIF3FO00303 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.04■□□□□ 0.48
EIF3FO00303 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.04■□□□□ 0.48
EIF3FO00303 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
EIF3FO00303 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.04■□□□□ 0.48
EIF3FO00303 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 AL139384.1-201ENST00000612143 3047 ntBASIC18.04■□□□□ 0.48
EIF3FO00303 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 AC093677.2-201ENST00000600169 1863 ntBASIC18.03■□□□□ 0.48
EIF3FO00303 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
EIF3FO00303 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
EIF3FO00303 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
EIF3FO00303 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
EIF3FO00303 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.03■□□□□ 0.48
EIF3FO00303 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.03■□□□□ 0.48
EIF3FO00303 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
EIF3FO00303 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.03■□□□□ 0.48
EIF3FO00303 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.03■□□□□ 0.48
EIF3FO00303 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.03■□□□□ 0.48
EIF3FO00303 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.03■□□□□ 0.48
EIF3FO00303 AL138966.2-201ENST00000621997 464 ntBASIC18.03■□□□□ 0.48
EIF3FO00303 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.03■□□□□ 0.48
EIF3FO00303 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 AC092865.7-201ENST00000641832 219 ntBASIC18.03■□□□□ 0.48
EIF3FO00303 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.03■□□□□ 0.48
EIF3FO00303 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.03■□□□□ 0.48
EIF3FO00303 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
EIF3FO00303 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
EIF3FO00303 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.03■□□□□ 0.48
EIF3FO00303 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.03■□□□□ 0.48
EIF3FO00303 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EIF3FO00303 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EIF3FO00303 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EIF3FO00303 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
EIF3FO00303 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EIF3FO00303 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EIF3FO00303 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.02■□□□□ 0.48
EIF3FO00303 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EIF3FO00303 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
EIF3FO00303 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.02■□□□□ 0.48
EIF3FO00303 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EIF3FO00303 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.02■□□□□ 0.48
EIF3FO00303 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
EIF3FO00303 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.02■□□□□ 0.48
EIF3FO00303 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.02■□□□□ 0.48
EIF3FO00303 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.02■□□□□ 0.48
EIF3FO00303 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.02■□□□□ 0.48
EIF3FO00303 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.02■□□□□ 0.48
EIF3FO00303 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.02■□□□□ 0.48
EIF3FO00303 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.02■□□□□ 0.48
EIF3FO00303 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.02■□□□□ 0.48
EIF3FO00303 AC141257.4-201ENST00000634557 245 ntBASIC18.02■□□□□ 0.48
EIF3FO00303 AC136944.6-201ENST00000634818 245 ntBASIC18.02■□□□□ 0.48
EIF3FO00303 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.02■□□□□ 0.47
EIF3FO00303 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.02■□□□□ 0.47
EIF3FO00303 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.02■□□□□ 0.47
EIF3FO00303 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
EIF3FO00303 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
EIF3FO00303 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
EIF3FO00303 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
EIF3FO00303 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
EIF3FO00303 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
EIF3FO00303 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
EIF3FO00303 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.02■□□□□ 0.47
EIF3FO00303 AC020916.1-201ENST00000587762 1774 ntBASIC18.02■□□□□ 0.47
EIF3FO00303 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
EIF3FO00303 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EIF3FO00303 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.01■□□□□ 0.47
EIF3FO00303 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EIF3FO00303 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
EIF3FO00303 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
EIF3FO00303 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms