Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NACAE9PAV3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.51□□□□□ -0.25
NACAE9PAV3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.51□□□□□ -0.25
NACAE9PAV3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.51□□□□□ -0.25
NACAE9PAV3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.51□□□□□ -0.25
NACAE9PAV3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.51□□□□□ -0.25
NACAE9PAV3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NACAE9PAV3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NACAE9PAV3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NACAE9PAV3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.5□□□□□ -0.25
NACAE9PAV3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.5□□□□□ -0.25
NACAE9PAV3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 KRT8P11-201ENST00000409686 1436 ntBASIC13.5□□□□□ -0.25
NACAE9PAV3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.5□□□□□ -0.25
NACAE9PAV3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
NACAE9PAV3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.5□□□□□ -0.25
NACAE9PAV3 AL031985.4-201ENST00000642138 673 ntBASIC13.5□□□□□ -0.25
NACAE9PAV3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.5□□□□□ -0.25
NACAE9PAV3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.5□□□□□ -0.25
NACAE9PAV3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.5□□□□□ -0.25
NACAE9PAV3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.5□□□□□ -0.25
NACAE9PAV3 AL133373.2-201ENST00000623187 2828 ntBASIC13.5□□□□□ -0.25
NACAE9PAV3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.5□□□□□ -0.25
NACAE9PAV3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.5□□□□□ -0.25
NACAE9PAV3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NACAE9PAV3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
NACAE9PAV3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
NACAE9PAV3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.49□□□□□ -0.25
NACAE9PAV3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 RBM17P1-201ENST00000453646 1190 ntBASIC13.49□□□□□ -0.25
NACAE9PAV3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.49□□□□□ -0.25
NACAE9PAV3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.49□□□□□ -0.25
NACAE9PAV3 AP002982.1-201ENST00000492365 877 ntBASIC13.49□□□□□ -0.25
NACAE9PAV3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.49□□□□□ -0.25
NACAE9PAV3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.49□□□□□ -0.25
NACAE9PAV3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.49□□□□□ -0.25
NACAE9PAV3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.49□□□□□ -0.25
NACAE9PAV3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.49□□□□□ -0.25
NACAE9PAV3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.49□□□□□ -0.25
NACAE9PAV3 AL499627.1-201ENST00000569373 2188 ntBASIC13.49□□□□□ -0.25
NACAE9PAV3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.49□□□□□ -0.25
NACAE9PAV3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
NACAE9PAV3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.49□□□□□ -0.25
NACAE9PAV3 AL355355.2-201ENST00000442321 338 ntBASIC13.49□□□□□ -0.25
NACAE9PAV3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.49□□□□□ -0.25
NACAE9PAV3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.49□□□□□ -0.25
NACAE9PAV3 AC026271.3-201ENST00000571884 352 ntBASIC13.49□□□□□ -0.25
NACAE9PAV3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.49□□□□□ -0.25
NACAE9PAV3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.49□□□□□ -0.25
NACAE9PAV3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 AC126763.1-201ENST00000552015 2118 ntBASIC13.49□□□□□ -0.25
NACAE9PAV3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NACAE9PAV3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NACAE9PAV3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NACAE9PAV3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NACAE9PAV3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.48□□□□□ -0.25
NACAE9PAV3 AC106820.2-201ENST00000563775 3264 ntBASIC13.48□□□□□ -0.25
NACAE9PAV3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NACAE9PAV3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NACAE9PAV3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NACAE9PAV3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NACAE9PAV3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NACAE9PAV3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.48□□□□□ -0.25
NACAE9PAV3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms