Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 AC116562.4-201ENST00000641316 2276 ntBASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 GUSBP12-201ENST00000513727 720 ntBASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 KRT18P41-201ENST00000518924 1277 ntBASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.36■□□□□ 0.53
TBC1D3FA6NER0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 AC012615.1-201ENST00000565797 1299 ntBASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 AC111152.3-201ENST00000569699 673 ntBASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 AC124864.1-201ENST00000623408 392 ntBASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3FA6NER0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 RN7SL510P-201ENST00000581311 263 ntBASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3FA6NER0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TBC1D3FA6NER0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.33■□□□□ 0.53
TBC1D3FA6NER0 AC099343.3-201ENST00000605834 2503 ntBASIC18.33■□□□□ 0.53
TBC1D3FA6NER0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.33■□□□□ 0.53
TBC1D3FA6NER0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.33■□□□□ 0.53
TBC1D3FA6NER0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TBC1D3FA6NER0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TBC1D3FA6NER0 AL353692.3-201ENST00000407031 1396 ntBASIC18.33■□□□□ 0.53
TBC1D3FA6NER0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms