Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 TSPY19P-201ENST00000418461 509 ntBASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 TSPY18P-201ENST00000441642 509 ntBASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 LINC00265-3P-201ENST00000447588 903 ntBASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 AC024563.2-201ENST00000603282 481 ntBASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 AL121772.3-201ENST00000610840 674 ntBASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1G3Q9Y6M4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 IGHGP-201ENST00000390555 1178 ntBASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 TOB2P1-201ENST00000469761 992 ntBASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 AP000867.3-201ENST00000524675 377 ntBASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 IGHV3-41-201ENST00000613121 348 ntBASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1G3Q9Y6M4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 KRT17P6-201ENST00000453795 1220 ntBASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 KRT18P41-201ENST00000518924 1277 ntBASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 Z98044.1-201ENST00000632503 1764 ntBASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CSNK1G3Q9Y6M4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 AP000974.1-201ENST00000623909 2387 ntBASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 AP000593.1-201ENST00000393668 712 ntBASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 AL845331.1-201ENST00000424978 1190 ntBASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 UNC93B7-201ENST00000509439 705 ntBASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 LINC01711-201ENST00000598340 967 ntBASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms