Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 AFG3L1P-217ENST00000557444 2447 ntBASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 FGFR3P6-201ENST00000457012 610 ntBASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 MIR5100-201ENST00000579544 119 ntBASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 AC083906.6-201ENST00000641366 219 ntBASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.19■□□□□ 0.82
SCN10AQ9Y5Y9 AC099343.3-201ENST00000605834 2503 ntBASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 RBM17P3-201ENST00000417687 1192 ntBASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 AC139887.3-201ENST00000568585 713 ntBASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 AC117500.6-201ENST00000624871 588 ntBASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN10AQ9Y5Y9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 SCARNA2-201ENST00000458748 420 ntBASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 INTS4P1-201ENST00000438455 1935 ntBASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 HNRNPDP1-201ENST00000439535 754 ntBASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 RNPS1P1-201ENST00000507437 918 ntBASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 AC139530.3-201ENST00000620344 690 ntBASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCN10AQ9Y5Y9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 TP73-AS1-210ENST00000637775 1455 ntBASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SCN10AQ9Y5Y9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms