Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC28.49■■■□□ 2.15
CDK11AQ9UQ88 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 AC132008.2-207ENST00000454517 770 ntBASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 AC008608.2-201ENST00000606089 416 ntBASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC28.48■■■□□ 2.15
CDK11AQ9UQ88 AL158211.5-201ENST00000623583 2518 ntBASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 AC009102.3-201ENST00000623118 1491 ntBASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 AL032819.2-201ENST00000624543 2162 ntBASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 THAP5-204ENST00000438865 868 ntTSL 2 BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
CDK11AQ9UQ88 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CDK11AQ9UQ88 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CDK11AQ9UQ88 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CDK11AQ9UQ88 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC28.45■■■□□ 2.15
CDK11AQ9UQ88 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CDK11AQ9UQ88 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC28.45■■■□□ 2.15
CDK11AQ9UQ88 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.15
CDK11AQ9UQ88 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 AC093909.1-201ENST00000504731 1122 ntBASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
CDK11AQ9UQ88 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 AC018712.1-201ENST00000455767 687 ntBASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 AC005336.2-201ENST00000593183 939 ntBASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms