Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 AC073314.1-201ENST00000568729 2216 ntBASIC17.44■□□□□ 0.38
LHX6Q9UPM6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.44■□□□□ 0.38
LHX6Q9UPM6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 AC145285.3-201ENST00000564603 959 ntBASIC17.44■□□□□ 0.38
LHX6Q9UPM6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.44■□□□□ 0.38
LHX6Q9UPM6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.44■□□□□ 0.38
LHX6Q9UPM6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 SEC1P-202ENST00000473944 940 ntBASIC17.43■□□□□ 0.38
LHX6Q9UPM6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 AC040169.1-201ENST00000565382 521 ntBASIC17.43■□□□□ 0.38
LHX6Q9UPM6 AC005332.3-201ENST00000589904 676 ntBASIC17.43■□□□□ 0.38
LHX6Q9UPM6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 AC008608.2-201ENST00000606089 416 ntBASIC17.43■□□□□ 0.38
LHX6Q9UPM6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX6Q9UPM6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 RPS2P28-201ENST00000314255 741 ntBASIC17.42■□□□□ 0.38
LHX6Q9UPM6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.42■□□□□ 0.38
LHX6Q9UPM6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 KRT18P3-201ENST00000451602 1288 ntBASIC17.42■□□□□ 0.38
LHX6Q9UPM6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 MINOS1P3-201ENST00000457048 203 ntBASIC17.42■□□□□ 0.38
LHX6Q9UPM6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms