Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.97■□□□□ 0.79
CDT1Q9H211 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDT1Q9H211 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CDT1Q9H211 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDT1Q9H211 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 AC087289.5-201ENST00000586076 3175 ntBASIC19.96■□□□□ 0.79
CDT1Q9H211 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 Z83836.1-201ENST00000624605 1642 ntBASIC19.96■□□□□ 0.79
CDT1Q9H211 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CDT1Q9H211 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
CDT1Q9H211 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.96■□□□□ 0.79
CDT1Q9H211 AC005332.3-201ENST00000589904 676 ntBASIC19.96■□□□□ 0.79
CDT1Q9H211 AL390719.2-201ENST00000606993 987 ntBASIC19.96■□□□□ 0.79
CDT1Q9H211 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 AC093503.3-201ENST00000624917 2352 ntBASIC19.96■□□□□ 0.79
CDT1Q9H211 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDT1Q9H211 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDT1Q9H211 AL024508.2-201ENST00000607749 1894 ntBASIC19.96■□□□□ 0.79
CDT1Q9H211 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.96■□□□□ 0.79
CDT1Q9H211 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.79
CDT1Q9H211 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.95■□□□□ 0.79
CDT1Q9H211 AC016734.2-201ENST00000624325 1377 ntBASIC19.95■□□□□ 0.79
CDT1Q9H211 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CDT1Q9H211 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDT1Q9H211 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
CDT1Q9H211 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CDT1Q9H211 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.95■□□□□ 0.78
CDT1Q9H211 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.95■□□□□ 0.78
CDT1Q9H211 KRT8P26-201ENST00000534154 1276 ntBASIC19.95■□□□□ 0.78
CDT1Q9H211 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.95■□□□□ 0.78
CDT1Q9H211 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.95■□□□□ 0.78
CDT1Q9H211 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.95■□□□□ 0.78
CDT1Q9H211 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.95■□□□□ 0.78
CDT1Q9H211 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.95■□□□□ 0.78
CDT1Q9H211 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CDT1Q9H211 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDT1Q9H211 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDT1Q9H211 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDT1Q9H211 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDT1Q9H211 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.94■□□□□ 0.78
CDT1Q9H211 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDT1Q9H211 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDT1Q9H211 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDT1Q9H211 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
CDT1Q9H211 KRT89P-201ENST00000620027 1478 ntBASIC19.94■□□□□ 0.78
CDT1Q9H211 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDT1Q9H211 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.94■□□□□ 0.78
CDT1Q9H211 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDT1Q9H211 IGHGP-201ENST00000390555 1178 ntBASIC19.94■□□□□ 0.78
CDT1Q9H211 TSPY22P-201ENST00000427496 604 ntBASIC19.94■□□□□ 0.78
CDT1Q9H211 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.94■□□□□ 0.78
CDT1Q9H211 BX276092.5-203ENST00000456199 560 ntBASIC19.94■□□□□ 0.78
CDT1Q9H211 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.94■□□□□ 0.78
CDT1Q9H211 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.94■□□□□ 0.78
CDT1Q9H211 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDT1Q9H211 AL121672.3-201ENST00000608644 468 ntBASIC19.94■□□□□ 0.78
CDT1Q9H211 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDT1Q9H211 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDT1Q9H211 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.94■□□□□ 0.78
CDT1Q9H211 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDT1Q9H211 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.94■□□□□ 0.78
CDT1Q9H211 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.94■□□□□ 0.78
CDT1Q9H211 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CDT1Q9H211 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CDT1Q9H211 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms