Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NDC1Q9BTX1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
NDC1Q9BTX1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
NDC1Q9BTX1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 AL049812.1-201ENST00000432563 2267 ntBASIC17.64■□□□□ 0.41
NDC1Q9BTX1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 HBZP1-201ENST00000354915 429 ntBASIC17.64■□□□□ 0.41
NDC1Q9BTX1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 AC083906.6-201ENST00000641366 219 ntBASIC17.64■□□□□ 0.41
NDC1Q9BTX1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 AC005332.1-201ENST00000577698 1310 ntBASIC17.64■□□□□ 0.41
NDC1Q9BTX1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.64■□□□□ 0.41
NDC1Q9BTX1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 Z98044.1-201ENST00000632503 1764 ntBASIC17.63■□□□□ 0.41
NDC1Q9BTX1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 AL357033.4-201ENST00000617703 1807 ntBASIC17.63■□□□□ 0.41
NDC1Q9BTX1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 AC092597.1-201ENST00000487352 616 ntBASIC17.63■□□□□ 0.41
NDC1Q9BTX1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.63■□□□□ 0.41
NDC1Q9BTX1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 AC093503.3-201ENST00000624917 2352 ntBASIC17.62■□□□□ 0.41
NDC1Q9BTX1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 AC009065.1-201ENST00000564055 1225 ntBASIC17.62■□□□□ 0.41
NDC1Q9BTX1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 AC090340.1-201ENST00000620778 4980 ntBASIC17.62■□□□□ 0.41
NDC1Q9BTX1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NDC1Q9BTX1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms