Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 ABCD1P5-201ENST00000445663 754 ntBASIC21.12■□□□□ 0.97
PTPN18Q99952 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPN18Q99952 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PTPN18Q99952 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.12■□□□□ 0.97
PTPN18Q99952 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPN18Q99952 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN18Q99952 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PTPN18Q99952 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.11■□□□□ 0.97
PTPN18Q99952 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN18Q99952 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN18Q99952 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PTPN18Q99952 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN18Q99952 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN18Q99952 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
PTPN18Q99952 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.11■□□□□ 0.97
PTPN18Q99952 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN18Q99952 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PTPN18Q99952 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN18Q99952 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.11■□□□□ 0.97
PTPN18Q99952 KRT18P41-201ENST00000518924 1277 ntBASIC21.11■□□□□ 0.97
PTPN18Q99952 AC040169.1-201ENST00000565382 521 ntBASIC21.11■□□□□ 0.97
PTPN18Q99952 MIR3687-2-201ENST00000577708 61 ntBASIC21.11■□□□□ 0.97
PTPN18Q99952 MIR3687-1-201ENST00000614492 61 ntBASIC21.11■□□□□ 0.97
PTPN18Q99952 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN18Q99952 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN18Q99952 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN18Q99952 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN18Q99952 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN18Q99952 AC125437.2-201ENST00000625180 2167 ntBASIC21.1■□□□□ 0.97
PTPN18Q99952 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.1■□□□□ 0.97
PTPN18Q99952 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.1■□□□□ 0.97
PTPN18Q99952 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.1■□□□□ 0.97
PTPN18Q99952 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PTPN18Q99952 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN18Q99952 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.1■□□□□ 0.97
PTPN18Q99952 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.1■□□□□ 0.97
PTPN18Q99952 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.1■□□□□ 0.97
PTPN18Q99952 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.1■□□□□ 0.97
PTPN18Q99952 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN18Q99952 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PTPN18Q99952 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPN18Q99952 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN18Q99952 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPN18Q99952 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN18Q99952 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN18Q99952 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PTPN18Q99952 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN18Q99952 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PTPN18Q99952 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.09■□□□□ 0.97
PTPN18Q99952 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.09■□□□□ 0.97
PTPN18Q99952 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
PTPN18Q99952 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.09■□□□□ 0.97
PTPN18Q99952 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPN18Q99952 AC008735.5-201ENST00000623544 497 ntBASIC21.09■□□□□ 0.97
PTPN18Q99952 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PTPN18Q99952 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 AC125634.1-201ENST00000438758 1403 ntBASIC21.09■□□□□ 0.97
PTPN18Q99952 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PTPN18Q99952 AL356309.3-201ENST00000624132 1934 ntBASIC21.09■□□□□ 0.97
PTPN18Q99952 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 AC099343.3-201ENST00000605834 2503 ntBASIC21.09■□□□□ 0.97
PTPN18Q99952 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN18Q99952 MTMR9LP-203ENST00000426597 1545 ntBASIC21.09■□□□□ 0.97
PTPN18Q99952 HEIH-201ENST00000623091 1652 ntBASIC21.09■□□□□ 0.97
PTPN18Q99952 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN18Q99952 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN18Q99952 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN18Q99952 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN18Q99952 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.08■□□□□ 0.97
PTPN18Q99952 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN18Q99952 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN18Q99952 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN18Q99952 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PTPN18Q99952 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN18Q99952 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN18Q99952 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.08■□□□□ 0.97
PTPN18Q99952 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.08■□□□□ 0.97
PTPN18Q99952 DNAJB3-201ENST00000446806 729 ntBASIC21.08■□□□□ 0.97
PTPN18Q99952 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.08■□□□□ 0.97
PTPN18Q99952 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms