Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC3Q96DC8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 IER3-202ENST00000376377 1350 ntBASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 AC024563.2-201ENST00000603282 481 ntBASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 RNF165-205ENST00000588679 2904 ntBASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 AL024508.2-201ENST00000607749 1894 ntBASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ECHDC3Q96DC8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 WIZP1-201ENST00000531444 2299 ntBASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 AC099343.3-201ENST00000605834 2503 ntBASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ECHDC3Q96DC8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms