Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 LINC00167-201ENST00000530583 1419 ntBASIC21.89■■□□□ 1.1
SH3RF3Q8TEJ3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SH3RF3Q8TEJ3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SH3RF3Q8TEJ3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.89■■□□□ 1.1
SH3RF3Q8TEJ3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SH3RF3Q8TEJ3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.89■■□□□ 1.1
SH3RF3Q8TEJ3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SH3RF3Q8TEJ3 AC233702.3-201ENST00000578656 1387 ntBASIC21.89■■□□□ 1.1
SH3RF3Q8TEJ3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SH3RF3Q8TEJ3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SH3RF3Q8TEJ3 AC005082.1-201ENST00000413042 2259 ntBASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 AC012615.1-201ENST00000565797 1299 ntBASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 AL691432.3-201ENST00000621860 400 ntBASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF3Q8TEJ3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 TPM4P1-201ENST00000436100 807 ntBASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 AC091607.1-201ENST00000490318 1060 ntBASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 FOSL1P1-201ENST00000511041 816 ntBASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 RN7SL510P-201ENST00000581311 263 ntBASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.88■■□□□ 1.09
SH3RF3Q8TEJ3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 AC026396.1-201ENST00000419388 421 ntBASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 AL845331.1-201ENST00000424978 1190 ntBASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 GUSBP12-201ENST00000513727 720 ntBASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 AC074051.2-201ENST00000565115 352 ntBASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 AP005901.3-202ENST00000581653 237 ntBASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 AL024508.2-201ENST00000607749 1894 ntBASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.87■■□□□ 1.09
SH3RF3Q8TEJ3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 TSPY19P-201ENST00000418461 509 ntBASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms