Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 AC073592.3-201ENST00000625118 1834 ntBASIC21.28■■□□□ 1
CCDC148Q8NFR7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
CCDC148Q8NFR7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 YBX1P2-201ENST00000489612 999 ntBASIC21.28■■□□□ 1
CCDC148Q8NFR7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.28■■□□□ 1
CCDC148Q8NFR7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CCDC148Q8NFR7 AC139887.4-201ENST00000607877 719 ntBASIC21.28■■□□□ 1
CCDC148Q8NFR7 AC006011.2-201ENST00000621313 1158 ntBASIC21.28■■□□□ 1
CCDC148Q8NFR7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.28■■□□□ 1
CCDC148Q8NFR7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.28■■□□□ 1
CCDC148Q8NFR7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.28■■□□□ 1
CCDC148Q8NFR7 AC126763.1-201ENST00000552015 2118 ntBASIC21.28■■□□□ 1
CCDC148Q8NFR7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
CCDC148Q8NFR7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC148Q8NFR7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC148Q8NFR7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.27■■□□□ 1
CCDC148Q8NFR7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.27■■□□□ 1
CCDC148Q8NFR7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC148Q8NFR7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC148Q8NFR7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC148Q8NFR7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC148Q8NFR7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.27■■□□□ 1
CCDC148Q8NFR7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC148Q8NFR7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC148Q8NFR7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC148Q8NFR7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC148Q8NFR7 TMPOP1-202ENST00000424642 1267 ntBASIC21.27■■□□□ 1
CCDC148Q8NFR7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.27■■□□□ 1
CCDC148Q8NFR7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.27■■□□□ 1
CCDC148Q8NFR7 GCSHP2-201ENST00000560971 527 ntBASIC21.27■■□□□ 1
CCDC148Q8NFR7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC148Q8NFR7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.27■■□□□ 1
CCDC148Q8NFR7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC148Q8NFR7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.27■■□□□ 1
CCDC148Q8NFR7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
CCDC148Q8NFR7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC148Q8NFR7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 AL163051.1-201ENST00000569214 1512 ntBASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 AC034232.1-201ENST00000506026 1064 ntBASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 AL441883.1-201ENST00000566170 1045 ntBASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC148Q8NFR7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 MIR3917-201ENST00000580971 93 ntBASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 AC011558.1-201ENST00000623459 338 ntBASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 AC020763.4-201ENST00000623414 4170 ntBASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC148Q8NFR7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms