Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC27.29■■□□□ 1.96
ABCA6Q8N139 AC125437.2-201ENST00000625180 2167 ntBASIC27.28■■□□□ 1.96
ABCA6Q8N139 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
ABCA6Q8N139 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
ABCA6Q8N139 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC27.28■■□□□ 1.96
ABCA6Q8N139 AC112482.1-201ENST00000492080 688 ntBASIC27.28■■□□□ 1.96
ABCA6Q8N139 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC27.28■■□□□ 1.96
ABCA6Q8N139 UNC93B6-202ENST00000528242 690 ntBASIC27.28■■□□□ 1.96
ABCA6Q8N139 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC27.28■■□□□ 1.96
ABCA6Q8N139 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
ABCA6Q8N139 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
ABCA6Q8N139 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
ABCA6Q8N139 AL356309.3-201ENST00000624132 1934 ntBASIC27.28■■□□□ 1.96
ABCA6Q8N139 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCA6Q8N139 AC112907.3-201ENST00000577781 2400 ntBASIC27.28■■□□□ 1.96
ABCA6Q8N139 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC27.28■■□□□ 1.96
ABCA6Q8N139 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC27.28■■□□□ 1.96
ABCA6Q8N139 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC27.27■■□□□ 1.96
ABCA6Q8N139 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC27.27■■□□□ 1.96
ABCA6Q8N139 AC107918.4-202ENST00000641623 219 ntBASIC27.27■■□□□ 1.96
ABCA6Q8N139 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ABCA6Q8N139 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC27.27■■□□□ 1.96
ABCA6Q8N139 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ABCA6Q8N139 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
ABCA6Q8N139 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ABCA6Q8N139 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
ABCA6Q8N139 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC27.27■■□□□ 1.96
ABCA6Q8N139 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ABCA6Q8N139 METTL21AP1-201ENST00000438852 635 ntBASIC27.27■■□□□ 1.96
ABCA6Q8N139 RNA5SP416-201ENST00000516838 111 ntBASIC27.27■■□□□ 1.96
ABCA6Q8N139 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC27.27■■□□□ 1.96
ABCA6Q8N139 RNF151-202ENST00000569210 853 ntTSL 2 BASIC27.27■■□□□ 1.96
ABCA6Q8N139 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ABCA6Q8N139 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA6Q8N139 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA6Q8N139 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA6Q8N139 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA6Q8N139 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA6Q8N139 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC27.26■■□□□ 1.95
ABCA6Q8N139 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
ABCA6Q8N139 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC27.26■■□□□ 1.95
ABCA6Q8N139 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA6Q8N139 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA6Q8N139 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA6Q8N139 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA6Q8N139 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC27.26■■□□□ 1.95
ABCA6Q8N139 CRCP-205ENST00000431089 942 ntTSL 2 BASIC27.26■■□□□ 1.95
ABCA6Q8N139 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA6Q8N139 AC068472.1-201ENST00000474589 881 ntBASIC27.26■■□□□ 1.95
ABCA6Q8N139 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA6Q8N139 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC27.26■■□□□ 1.95
ABCA6Q8N139 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC27.26■■□□□ 1.95
ABCA6Q8N139 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC27.25■■□□□ 1.95
ABCA6Q8N139 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA6Q8N139 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA6Q8N139 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA6Q8N139 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA6Q8N139 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA6Q8N139 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA6Q8N139 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC27.25■■□□□ 1.95
ABCA6Q8N139 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
ABCA6Q8N139 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA6Q8N139 COA5-202ENST00000409997 557 ntTSL 4 BASIC27.25■■□□□ 1.95
ABCA6Q8N139 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC27.25■■□□□ 1.95
ABCA6Q8N139 MTDHP4-201ENST00000600287 670 ntBASIC27.25■■□□□ 1.95
ABCA6Q8N139 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
ABCA6Q8N139 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA6Q8N139 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA6Q8N139 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA6Q8N139 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC27.25■■□□□ 1.95
ABCA6Q8N139 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA6Q8N139 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA6Q8N139 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC27.24■■□□□ 1.95
ABCA6Q8N139 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA6Q8N139 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA6Q8N139 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC27.24■■□□□ 1.95
ABCA6Q8N139 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC27.24■■□□□ 1.95
ABCA6Q8N139 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA6Q8N139 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA6Q8N139 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA6Q8N139 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA6Q8N139 AC009947.1-201ENST00000444350 727 ntBASIC27.23■■□□□ 1.95
ABCA6Q8N139 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA6Q8N139 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA6Q8N139 CLDN5-201ENST00000403084 2357 ntBASIC27.23■■□□□ 1.95
ABCA6Q8N139 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA6Q8N139 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA6Q8N139 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA6Q8N139 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA6Q8N139 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms