Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 AC112482.1-201ENST00000492080 688 ntBASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 AC005336.2-201ENST00000593183 939 ntBASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 UPF3AP3-201ENST00000420996 769 ntBASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 AP006288.1-201ENST00000446065 395 ntBASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 AC073648.2-201ENST00000510116 352 ntBASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 VENTXP7-201ENST00000475503 772 ntBASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 RFPL4AP1-201ENST00000530883 850 ntBASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 AC025062.2-201ENST00000605477 670 ntBASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.38□□□□□ -0.59
VPS13BQ7Z7G8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 HTR5BP-201ENST00000430851 1154 ntBASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 MIR3197-201ENST00000582241 73 ntBASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 AC132008.2-207ENST00000454517 770 ntBASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 AL357033.4-201ENST00000617703 1807 ntBASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms