Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.82□□□□□ -0.36
CSMD3Q7Z407 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 RBM17P3-201ENST00000417687 1192 ntBASIC12.82□□□□□ -0.36
CSMD3Q7Z407 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 ALG1L5P-201ENST00000482043 771 ntBASIC12.82□□□□□ -0.36
CSMD3Q7Z407 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 AC009533.2-201ENST00000543664 586 ntBASIC12.82□□□□□ -0.36
CSMD3Q7Z407 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 IRX1P1-201ENST00000438849 1838 ntBASIC12.82□□□□□ -0.36
CSMD3Q7Z407 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 SPCS2P1-201ENST00000561636 679 ntBASIC12.82□□□□□ -0.36
CSMD3Q7Z407 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 GABARAPL3-202ENST00000624044 1851 ntBASIC12.81□□□□□ -0.36
CSMD3Q7Z407 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 RPS2P28-201ENST00000314255 741 ntBASIC12.81□□□□□ -0.36
CSMD3Q7Z407 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.81□□□□□ -0.36
CSMD3Q7Z407 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 RNA5SP415-201ENST00000517246 115 ntBASIC12.81□□□□□ -0.36
CSMD3Q7Z407 KRT18P41-201ENST00000518924 1277 ntBASIC12.81□□□□□ -0.36
CSMD3Q7Z407 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD3Q7Z407 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.8□□□□□ -0.36
CSMD3Q7Z407 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 ADK-206ENST00000541550 2222 ntTSL 2 BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.8□□□□□ -0.36
CSMD3Q7Z407 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 FP475955.4-201ENST00000623131 1990 ntBASIC12.8□□□□□ -0.36
CSMD3Q7Z407 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms