Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM4P67936 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.73■□□□□ 0.91
TPM4P67936 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.73■□□□□ 0.91
TPM4P67936 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TPM4P67936 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TPM4P67936 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM4P67936 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.73■□□□□ 0.91
TPM4P67936 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.73■□□□□ 0.91
TPM4P67936 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TPM4P67936 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM4P67936 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM4P67936 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.73■□□□□ 0.91
TPM4P67936 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TPM4P67936 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TPM4P67936 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM4P67936 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM4P67936 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM4P67936 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM4P67936 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM4P67936 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
TPM4P67936 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
TPM4P67936 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM4P67936 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM4P67936 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM4P67936 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM4P67936 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM4P67936 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.72■□□□□ 0.91
TPM4P67936 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.72■□□□□ 0.91
TPM4P67936 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.72■□□□□ 0.91
TPM4P67936 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.72■□□□□ 0.91
TPM4P67936 AC093677.2-201ENST00000600169 1863 ntBASIC20.72■□□□□ 0.91
TPM4P67936 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM4P67936 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
TPM4P67936 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM4P67936 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM4P67936 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM4P67936 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
TPM4P67936 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.72■□□□□ 0.91
TPM4P67936 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TPM4P67936 KRT8P3-201ENST00000519669 1449 ntBASIC20.71■□□□□ 0.91
TPM4P67936 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.71■□□□□ 0.91
TPM4P67936 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.71■□□□□ 0.91
TPM4P67936 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.71■□□□□ 0.91
TPM4P67936 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.71■□□□□ 0.91
TPM4P67936 IKBKGP1-201ENST00000612193 1073 ntBASIC20.71■□□□□ 0.91
TPM4P67936 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.71■□□□□ 0.91
TPM4P67936 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
TPM4P67936 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
TPM4P67936 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TPM4P67936 AL357033.4-201ENST00000617703 1807 ntBASIC20.71■□□□□ 0.91
TPM4P67936 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.71■□□□□ 0.91
TPM4P67936 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TPM4P67936 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.71■□□□□ 0.91
TPM4P67936 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TPM4P67936 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM4P67936 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TPM4P67936 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TPM4P67936 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM4P67936 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM4P67936 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM4P67936 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM4P67936 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.7■□□□□ 0.9
TPM4P67936 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM4P67936 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TPM4P67936 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TPM4P67936 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM4P67936 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM4P67936 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM4P67936 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
TPM4P67936 POM121L13P-201ENST00000422362 380 ntBASIC20.7■□□□□ 0.9
TPM4P67936 GUSBP6-202ENST00000438529 1198 ntBASIC20.7■□□□□ 0.9
TPM4P67936 PRSS44-201ENST00000515154 1146 ntBASIC20.7■□□□□ 0.9
TPM4P67936 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.7■□□□□ 0.9
TPM4P67936 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.7■□□□□ 0.9
TPM4P67936 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.7■□□□□ 0.9
TPM4P67936 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TPM4P67936 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TPM4P67936 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM4P67936 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.7■□□□□ 0.9
TPM4P67936 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.7■□□□□ 0.9
TPM4P67936 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
TPM4P67936 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TPM4P67936 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.69■□□□□ 0.9
TPM4P67936 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM4P67936 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms